RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NPAS4Q8IUM7 802 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 RNF169Q8NCN4 708 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 DRC1Q96MC2 740 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 HAPLN2Q9GZV7 340 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 PDZD7Q9H5P4 517 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 ZNF576Q9H609 170 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 FAM105AQ9NUU6 356 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 KBTBD4Q9NVX7 518 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 CCDC39Q9UFE4 941 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 MTUS1Q9ULD2 1270 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 ZNF232Q9UNY5 417 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 TCHHQ07283 1943 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 KIAA1671Q9BY89 1806 aa10.42□□□□□ -0.74
NPLOC4-219ENST00000576713 A0A1B0GUA9 196 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 TISP43B9A030 160 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 MEFVO15553 781 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 ZSCAN20P17040 1043 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 TXLNAP40222 546 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 PLA2G4AP47712 749 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 KCNA1Q09470 495 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 CUL4BQ13620 913 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 ADGRE1Q14246 886 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 FAM187BQ17R55 369 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 ZC2HC1CQ53FD0 456 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 TWF2Q6IBS0 349 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 CCDC73Q6ZRK6 1079 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 CAPN12Q6ZSI9 719 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 SV2BQ7L1I2 683 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 SFR1Q86XK3 245 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 DEPTORQ8TB45 409 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 ZBTB45Q96K62 511 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 IFT74Q96LB3 600 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 CASD1Q96PB1 797 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 YME1L1Q96TA2 773 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 NTPCRQ9BSD7 190 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 SCAND2PQ9GZW5 306 aaPredicted RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 BLZF1Q9H2G9 400 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 PRDM12Q9H4Q4 367 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 KMT5AQ9NQR1 393 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 CHST12Q9NRB3 414 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 C1orf112Q9NSG2 853 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 TMEM161AQ9NX61 479 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 KCND2Q9NZV8 630 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 ODF2LQ9ULJ1 636 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 INSL6Q9Y581 213 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 PCDHB2Q9Y5E7 798 aa10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 MRPL42Q9Y6G3 142 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-219ENST00000576713 PHLPP2Q6ZVD8 1323 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 FRMD3A2A2Y4 597 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ACKR2O00590 384 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 LPXNO60711 386 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ERLIN2O94905 339 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 NPTXRO95502 500 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 PBX3P40426 434 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 DMP1Q13316 513 aaPredicted RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ODR4Q5SWX8 454 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 SLC39A4Q6P5W5 647 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MRPL10Q7Z7H8 261 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ZBTB8OSQ8IWT0 167 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TMEM192Q8IY95 271 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TMEM130Q8N3G9 435 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MYCT1Q8N699 235 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 CEP120Q8N960 986 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 FSIP1Q8NA03 581 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 HELQQ8TDG4 1101 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MYLIPQ8WY64 445 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 COL26A1Q96A83 441 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MKNK1Q9BUB5 465 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TIPINQ9BVW5 301 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TARS2Q9BW92 718 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 STRA6Q9BX79 667 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TRIM9Q9C026 710 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 C2orf40Q9H1Z8 148 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ZHX3Q9H4I2 956 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 CWH43Q9H720 699 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ELAC1Q9H777 363 aaKnown RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 SLC28A3Q9HAS3 691 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 PTPRHQ9HD43 1115 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 PRMT7Q9NVM4 692 aaPredicted RBP10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MIOSQ9NXC5 875 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 CHMP5Q9NZZ3 219 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 TBC1D7Q9P0N9 293 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 MSRAQ9UJ68 235 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 IPPQ9Y573 584 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 PCDHB7Q9Y5E2 793 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.74
NPLOC4-219ENST00000576713 FNDC1Q4ZHG4 1894 aaPredicted RBP10.4□□□□□ -0.75
NPLOC4-219ENST00000576713 A0A1W2PQ27 194 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 A0A1W2PQ64 194 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 A0A1W2PQD8 194 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 TBKBP1A7MCY6 615 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 K7ERI5 159 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 ZNF623O75123 536 aa10.39□□□□□ -0.75
NPLOC4-219ENST00000576713 OFD1O75665 1012 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms