RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 FAM13AO94988 1023 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 MCF2P10911 925 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 SLC12A3P55017 1021 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 NOLC1Q14978 699 aaKnown RBP eCLIP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 SF3A1Q15459 793 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 NAB2Q15742 525 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 TMEM119Q4V9L6 283 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 FOXD4L5Q5VV16 416 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 PDXDC1Q6P996 788 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 TAS1R3Q7RTX0 852 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 BMP8AQ7Z5Y6 402 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 KCTD17Q8N5Z5 321 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 CMASQ8NFW8 434 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 FOXD4L4Q8WXT5 416 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 UROC1Q96N76 676 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 ACAP3Q96P50 834 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 PPP1R10Q96QC0 940 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 KCND2Q9NZV8 630 aa10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 LARSQ9P2J5 1176 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-216ENST00000574344 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 K7ENM7 598 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 SLC26A4O43511 780 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 TBCAO75347 108 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 F13A1P00488 732 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 PLCG1P19174 1290 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 SYT1P21579 422 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 LONP1P36776 959 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 KARSQ15046 597 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 CYP26C1Q6V0L0 522 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 TMEM161BQ8NDZ6 487 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 ASIC4Q96FT7 647 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 SNX27Q96L92 541 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 KCNH6Q9H252 994 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 MFSD1Q9H3U5 465 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 SMOC2Q9H3U7 446 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 WDR6Q9NNW5 1121 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 ZDHHC7Q9NXF8 308 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 ODF2LQ9ULJ1 636 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 NUB1Q9Y5A7 615 aa10.56□□□□□ -0.72
NPLOC4-216ENST00000574344 MIA3Q5JRA6 1907 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 TMEM189-UBE2V1I3L0A0 370 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 I3L4J1 428 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PODXLO00592 558 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 CLDN3O15551 220 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 TOM1L1O75674 476 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 ZMYND10O75800 440 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PDGFBP01127 241 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 C8AP07357 584 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 MAPTP10636 758 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PROZP22891 400 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 TXLNAP40222 546 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 BRCC3P46736 316 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 LIG4P49917 911 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 MRE11P49959 708 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 CEBPZQ03701 1054 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 GRIN1Q05586 938 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 MCM6Q14566 821 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 UPP1Q16831 310 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 SEZ6Q53EL9 994 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PPM1LQ5SGD2 360 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 DCLRE1AQ6PJP8 1040 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 MYCT1Q8N699 235 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 LARP4BQ92615 738 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 DDX27Q96GQ7 796 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 CLSTN3Q9BQT9 956 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PRKD2Q9BZL6 878 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 PTPRHQ9HD43 1115 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 FBXL21Q9UKT6 434 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
NPLOC4-216ENST00000574344 CCL16O15467 120 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 XYLBO75191 536 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 C1RP00736 705 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 CXCL8P10145 99 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 FGFR3P22607 806 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 RFX1P22670 979 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 MARCKSP29966 332 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 OR1D2P34982 312 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 VCPP55072 806 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 NCKAP1LP55160 1127 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 KRT85P78386 507 aa10.54□□□□□ -0.72
NPLOC4-216ENST00000574344 NHLH1Q02575 133 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms