RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 XKR4Q5GH76 650 aa9.09□□□□□ -0.95
APP-216ENST00000491395 PPM1LQ5SGD2 360 aa9.09□□□□□ -0.95
APP-216ENST00000491395 CWF19L1Q69YN2 538 aaKnown RBP9.09□□□□□ -0.95
APP-216ENST00000491395 GET4Q7L5D6 327 aaPredicted RBP9.09□□□□□ -0.95
APP-216ENST00000491395 SIX5Q8N196 739 aa9.09□□□□□ -0.95
APP-216ENST00000491395 C3orf58Q8NDZ4 430 aa9.09□□□□□ -0.95
APP-216ENST00000491395 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
APP-216ENST00000491395 ZMAT2Q96NC0 199 aaKnown RBP9.09□□□□□ -0.95
APP-216ENST00000491395 NTPCRQ9BSD7 190 aaKnown RBP9.09□□□□□ -0.95
APP-216ENST00000491395 CCDC94Q9BW85 323 aaPredicted RBP9.09□□□□□ -0.95
APP-216ENST00000491395 KIF3AQ9Y496 699 aa9.09□□□□□ -0.95
APP-216ENST00000491395 ARID2Q68CP9 1835 aa9.09□□□□□ -0.95
APP-216ENST00000491395 PHLPP2Q6ZVD8 1323 aa9.08□□□□□ -0.96
APP-216ENST00000491395 PTPRZ1P23471 2315 aaPredicted RBP9.08□□□□□ -0.96
APP-216ENST00000491395 KRBA1A5PL33 1030 aa9.08□□□□□ -0.96
APP-216ENST00000491395 TMEM189-UBE2V1I3L0A0 370 aa9.08□□□□□ -0.96
APP-216ENST00000491395 CCL16O15467 120 aa9.08□□□□□ -0.96
APP-216ENST00000491395 HNRNPA1P09651 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
APP-216ENST00000491395 PLA2G4BP0C869 781 aa9.08□□□□□ -0.96
APP-216ENST00000491395 MCF2P10911 925 aa9.08□□□□□ -0.96
APP-216ENST00000491395 PLS3P13797 630 aa9.08□□□□□ -0.96
APP-216ENST00000491395 SLC12A3P55017 1021 aa9.08□□□□□ -0.96
APP-216ENST00000491395 CACNB1Q02641 598 aaPredicted RBP9.08□□□□□ -0.96
APP-216ENST00000491395 HTR4Q13639 388 aa9.08□□□□□ -0.96
APP-216ENST00000491395 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
APP-216ENST00000491395 ARSHQ5FYA8 562 aa9.08□□□□□ -0.96
APP-216ENST00000491395 HYIQ5T013 277 aa9.08□□□□□ -0.96
APP-216ENST00000491395 LIN9Q5TKA1 542 aa9.08□□□□□ -0.96
APP-216ENST00000491395 PDXDC1Q6P996 788 aa9.08□□□□□ -0.96
APP-216ENST00000491395 MPZL3Q6UWV2 235 aa9.08□□□□□ -0.96
APP-216ENST00000491395 SYT2Q8N9I0 419 aaPredicted RBP9.08□□□□□ -0.96
APP-216ENST00000491395 TMEM161BQ8NDZ6 487 aa9.08□□□□□ -0.96
APP-216ENST00000491395 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
APP-216ENST00000491395 LRRC15Q8TF66 581 aa9.08□□□□□ -0.96
APP-216ENST00000491395 C18orf25Q96B23 403 aaPredicted RBP9.08□□□□□ -0.96
APP-216ENST00000491395 DDX27Q96GQ7 796 aaKnown RBP9.08□□□□□ -0.96
APP-216ENST00000491395 SNX27Q96L92 541 aa9.08□□□□□ -0.96
APP-216ENST00000491395 UROC1Q96N76 676 aa9.08□□□□□ -0.96
APP-216ENST00000491395 ACAP3Q96P50 834 aa9.08□□□□□ -0.96
APP-216ENST00000491395 RPP25Q9BUL9 199 aaKnown RBP9.08□□□□□ -0.96
APP-216ENST00000491395 IRF2BPLQ9H1B7 796 aa9.08□□□□□ -0.96
APP-216ENST00000491395 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
APP-216ENST00000491395 TOPORSQ9NS56 1045 aaPredicted RBP9.08□□□□□ -0.96
APP-216ENST00000491395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.08□□□□□ -0.96
APP-216ENST00000491395 MTRRQ9UBK8 725 aa9.08□□□□□ -0.96
APP-216ENST00000491395 POLIQ9UNA4 740 aa9.08□□□□□ -0.96
APP-216ENST00000491395 BACE2Q9Y5Z0 518 aa9.08□□□□□ -0.96
APP-216ENST00000491395 CDY1Q9Y6F8 540 aa9.08□□□□□ -0.96
APP-216ENST00000491395 RIF1Q5UIP0 2472 aaKnown RBP9.07□□□□□ -0.96
APP-216ENST00000491395 ANHXE9PGG2 379 aa9.07□□□□□ -0.96
APP-216ENST00000491395 STK25O00506 426 aa9.07□□□□□ -0.96
APP-216ENST00000491395 PODXLO00592 558 aa9.07□□□□□ -0.96
APP-216ENST00000491395 TRAPPC3O43617 180 aa9.07□□□□□ -0.96
APP-216ENST00000491395 MAPTP10636 758 aaKnown RBP9.07□□□□□ -0.96
APP-216ENST00000491395 KCNE1P15382 129 aa9.07□□□□□ -0.96
APP-216ENST00000491395 AOC1P19801 751 aa9.07□□□□□ -0.96
APP-216ENST00000491395 SMTNP53814 917 aa9.07□□□□□ -0.96
APP-216ENST00000491395 STRN3Q13033 797 aa9.07□□□□□ -0.96
APP-216ENST00000491395 SLC10A6Q3KNW5 377 aa9.07□□□□□ -0.96
APP-216ENST00000491395 TMEM119Q4V9L6 283 aa9.07□□□□□ -0.96
APP-216ENST00000491395 AXDND1Q5T1B0 1012 aaPredicted RBP9.07□□□□□ -0.96
APP-216ENST00000491395 LARP1BQ659C4 914 aaKnown RBP9.07□□□□□ -0.96
APP-216ENST00000491395 PARM1Q6UWI2 310 aa9.07□□□□□ -0.96
APP-216ENST00000491395 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
APP-216ENST00000491395 TMEM130Q8N3G9 435 aa9.07□□□□□ -0.96
APP-216ENST00000491395 ITFG1Q8TB96 612 aa9.07□□□□□ -0.96
APP-216ENST00000491395 GPR152Q8TDT2 470 aa9.07□□□□□ -0.96
APP-216ENST00000491395 NXPE3Q969Y0 559 aa9.07□□□□□ -0.96
APP-216ENST00000491395 CDK5RAP3Q96JB5 506 aa9.07□□□□□ -0.96
APP-216ENST00000491395 TIPINQ9BVW5 301 aa9.07□□□□□ -0.96
APP-216ENST00000491395 SLC38A7Q9NVC3 462 aa9.07□□□□□ -0.96
APP-216ENST00000491395 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
APP-216ENST00000491395 CNTN3Q9P232 1028 aa9.07□□□□□ -0.96
APP-216ENST00000491395 ANKFY1Q9P2R3 1169 aa9.07□□□□□ -0.96
APP-216ENST00000491395 WNT16Q9UBV4 365 aa9.07□□□□□ -0.96
APP-216ENST00000491395 CDH7Q9ULB5 785 aa9.07□□□□□ -0.96
APP-216ENST00000491395 CA14Q9ULX7 337 aa9.07□□□□□ -0.96
APP-216ENST00000491395 SMC3Q9UQE7 1217 aa9.07□□□□□ -0.96
APP-216ENST00000491395 NUMBLQ9Y6R0 609 aa9.07□□□□□ -0.96
APP-216ENST00000491395 WDFY4Q6ZS81 3184 aa9.07□□□□□ -0.96
APP-216ENST00000491395 GFRA3O60609 400 aa9.06□□□□□ -0.96
APP-216ENST00000491395 XYLBO75191 536 aa9.06□□□□□ -0.96
APP-216ENST00000491395 TOM1L1O75674 476 aa9.06□□□□□ -0.96
APP-216ENST00000491395 SRFP11831 508 aa9.06□□□□□ -0.96
APP-216ENST00000491395 HOXA9P31269 272 aa9.06□□□□□ -0.96
APP-216ENST00000491395 RPL9P32969 192 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 ARPP19P56211 112 aa9.06□□□□□ -0.96
APP-216ENST00000491395 ROR1Q01973 937 aa9.06□□□□□ -0.96
APP-216ENST00000491395 GRIN1Q05586 938 aa9.06□□□□□ -0.96
APP-216ENST00000491395 SPAG1Q07617 926 aa9.06□□□□□ -0.96
APP-216ENST00000491395 DHX8Q14562 1220 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
APP-216ENST00000491395 VARS2Q5ST30 1063 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
APP-216ENST00000491395 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
APP-216ENST00000491395 DTWD2Q8NBA8 298 aa9.06□□□□□ -0.96
APP-216ENST00000491395 FGF13Q92913 245 aa9.06□□□□□ -0.96
APP-216ENST00000491395 FGF14Q92915 247 aa9.06□□□□□ -0.96
APP-216ENST00000491395 RTP3Q9BQQ7 232 aa9.06□□□□□ -0.96
APP-216ENST00000491395 HAPLN2Q9GZV7 340 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms