RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KCNG1Q9UIX4 513 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 SMC3Q9UQE7 1217 aa23.06■■□□□ 1.28
VSX1-206ENST00000444511 HARSP12081 509 aaKnown RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 LAMP2P13473 410 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 FSHRP23945 695 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 IGFBP6P24592 240 aaPredicted RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 OR1D2P34982 312 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 SMTNP53814 917 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 ARL6IP4Q66PJ3 421 aaKnown RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 MPZL3Q6UWV2 235 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 GRASPQ7Z6J2 395 aaPredicted RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 SLC44A3Q8N4M1 653 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 SPIRE2Q8WWL2 714 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 DDX27Q96GQ7 796 aaKnown RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 ACAP3Q96P50 834 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 NTPCRQ9BSD7 190 aaKnown RBP23.05■■□□□ 1.28
VSX1-206ENST00000444511 MTRRQ9UBK8 725 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 POLIQ9UNA4 740 aa23.05■■□□□ 1.28
VSX1-206ENST00000444511 XYLBO75191 536 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 CFHP08603 1231 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 PLS3P13797 630 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 PROZP22891 400 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 TKTP29401 623 aaKnown RBP23.04■■□□□ 1.28
VSX1-206ENST00000444511 HOXA9P31269 272 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 RAB33AQ14088 237 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 XKR4Q5GH76 650 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 CWF19L1Q69YN2 538 aaKnown RBP23.04■■□□□ 1.28
VSX1-206ENST00000444511 ALKAL1Q6UXT8 129 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 ANKS3Q6ZW76 656 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 SYT2Q8N9I0 419 aaPredicted RBP23.04■■□□□ 1.28
VSX1-206ENST00000444511 SLC7A14Q8TBB6 771 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 SNX27Q96L92 541 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 CDY1Q9Y6F8 540 aa23.04■■□□□ 1.28
VSX1-206ENST00000444511 I3L4J1 428 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 CCL16O15467 120 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 PLA2G4BP0C869 781 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 BRCC3P46736 316 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 SOX4Q06945 474 aaPredicted RBP23.03■■□□□ 1.28
VSX1-206ENST00000444511 AXDND1Q5T1B0 1012 aaPredicted RBP23.03■■□□□ 1.28
VSX1-206ENST00000444511 CD300LGQ6UXG3 332 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 C3orf58Q8NDZ4 430 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 KCND2Q9NZV8 630 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 ANKFY1Q9P2R3 1169 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 WNT16Q9UBV4 365 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.03■■□□□ 1.28
VSX1-206ENST00000444511 BACE2Q9Y5Z0 518 aa23.03■■□□□ 1.28
VSX1-206ENST00000444511 ZFP37Q9Y6Q3 630 aaPredicted RBP23.03■■□□□ 1.28
VSX1-206ENST00000444511 MTCL1Q9Y4B5 1905 aaKnown RBP23.02■■□□□ 1.28
VSX1-206ENST00000444511 PODXLO00592 558 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 ABLIM1O14639 778 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 TOM1L1O75674 476 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 SRFP11831 508 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 KCNE1P15382 129 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 NPR3P17342 541 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 AOC1P19801 751 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 RFX1P22670 979 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 SLC12A3P55017 1021 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 NTHL1P78549 312 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 UVSSAQ2YD98 709 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 TMEM161BQ8NDZ6 487 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 ZBTB45Q96K62 511 aaPredicted RBP23.02■■□□□ 1.28
VSX1-206ENST00000444511 ZMAT2Q96NC0 199 aaKnown RBP23.02■■□□□ 1.28
VSX1-206ENST00000444511 CNTN3Q9P232 1028 aa23.02■■□□□ 1.28
VSX1-206ENST00000444511 STK25O00506 426 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 MAPTP10636 758 aaKnown RBP23.01■■□□□ 1.27
VSX1-206ENST00000444511 HTR4Q13639 388 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 NOLC1Q14978 699 aaKnown RBP eCLIP23.01■■□□□ 1.27
VSX1-206ENST00000444511 TMEM119Q4V9L6 283 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 LARP1BQ659C4 914 aaKnown RBP23.01■■□□□ 1.27
VSX1-206ENST00000444511 AK8Q96MA6 479 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 RTP3Q9BQQ7 232 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 CDH7Q9ULB5 785 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 NUB1Q9Y5A7 615 aa23.01■■□□□ 1.27
VSX1-206ENST00000444511 ANHXE9PGG2 379 aa23■■□□□ 1.27
VSX1-206ENST00000444511 PI15O43692 258 aa23■■□□□ 1.27
VSX1-206ENST00000444511 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.27
VSX1-206ENST00000444511 CACNB1Q02641 598 aaPredicted RBP23■■□□□ 1.27
VSX1-206ENST00000444511 RSPO2Q6UXX9 243 aaPredicted RBP23■■□□□ 1.27
VSX1-206ENST00000444511 ZPBP2Q6X784 338 aa23■■□□□ 1.27
VSX1-206ENST00000444511 CALML4Q96GE6 196 aa23■■□□□ 1.27
VSX1-206ENST00000444511 LARSQ9P2J5 1176 aaKnown RBP23■■□□□ 1.27
VSX1-206ENST00000444511 CA14Q9ULX7 337 aa23■■□□□ 1.27
VSX1-206ENST00000444511 NUMBLQ9Y6R0 609 aa23■■□□□ 1.27
VSX1-206ENST00000444511 NPHP3-ACAD11A0A0J9YXS1 232 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 H0YCG3 227 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 CLDN3O15551 220 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 SLC26A4O43511 780 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 POU2F2P09086 479 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 RPL9P32969 192 aaKnown RBP22.99■■□□□ 1.27
VSX1-206ENST00000444511 UBA7P41226 1012 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 SEZ6Q53EL9 994 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 RTL10Q7L3V2 364 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 ST13P5Q8NFI4 369 aaPredicted RBP22.99■■□□□ 1.27
VSX1-206ENST00000444511 GPR152Q8TDT2 470 aa22.99■■□□□ 1.27
VSX1-206ENST00000444511 C18orf25Q96B23 403 aaPredicted RBP22.99■■□□□ 1.27
VSX1-206ENST00000444511 VWA8A3KMH1 1905 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 KRBA1A5PL33 1030 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 SYN3O14994 580 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 GFRA3O60609 400 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 BMP15O95972 392 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms