RNA–Protein interactions for RNA: ENST00000439830.5

ANKRD28-203, Transcript of ankyrin repeat domain 28, humanhuman

TSL 5

Gene ANKRD28, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-203ENST00000439830 TRAPPC3O43617 180 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 PLS3P13797 630 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 SMTNP53814 917 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 SLC12A3P55017 1021 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 TMEM119Q4V9L6 283 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 GET4Q7L5D6 327 aaPredicted RBP27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 SNX27Q96L92 541 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 ACAP3Q96P50 834 aa27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 NTPCRQ9BSD7 190 aaKnown RBP27.64■■■□□ 2.02
ANKRD28-203ENST00000439830 ABLIM1O14639 778 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 C8AP07357 584 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 HNRNPA1P09651 372 aaKnown RBP eCLIP27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 PLA2G4BP0C869 781 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 PPM1LQ5SGD2 360 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 LARP1BQ659C4 914 aaKnown RBP27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 ALKAL1Q6UXT8 129 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 AK8Q96MA6 479 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.63■■■□□ 2.013e-7■■■■□ 25.1
ANKRD28-203ENST00000439830 ANKFY1Q9P2R3 1169 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 MTRRQ9UBK8 725 aa27.63■■■□□ 2.01
ANKRD28-203ENST00000439830 ADAM12O43184 909 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 HARSP12081 509 aaKnown RBP27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 HOXA9P31269 272 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 SOX4Q06945 474 aaPredicted RBP27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 ASTLQ6HA08 431 aaPredicted RBP27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 TMEM105Q8N8V8 129 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 C3orf58Q8NDZ4 430 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 TMEM161BQ8NDZ6 487 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 DDX27Q96GQ7 796 aaKnown RBP27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 IRF2BPLQ9H1B7 796 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 FBXL21Q9UKT6 434 aa27.62■■■□□ 2.01
ANKRD28-203ENST00000439830 SLC26A4O43511 780 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 TOM1L1O75674 476 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 KCNE1P15382 129 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 IGFBP6P24592 240 aaPredicted RBP27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 TKTP29401 623 aaKnown RBP27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 OR1D2P34982 312 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 RAB33AQ14088 237 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 NOLC1Q14978 699 aaKnown RBP eCLIP27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 CD300LGQ6UXG3 332 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 NXPE3Q969Y0 559 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 CNTN3Q9P232 1028 aa27.61■■■□□ 2.01
ANKRD28-203ENST00000439830 GALR2O43603 387 aaPredicted RBP27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 BMP15O95972 392 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 MAPTP10636 758 aaKnown RBP27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 ZPBP2Q6X784 338 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 ANKS3Q6ZW76 656 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 RSAD2Q8WXG1 361 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 CALML4Q96GE6 196 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 ZMAT2Q96NC0 199 aaKnown RBP27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 PHOX2BQ99453 314 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 LARSQ9P2J5 1176 aaKnown RBP27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 BACE2Q9Y5Z0 518 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 CDY1Q9Y6F8 540 aa27.6■■■□□ 2.01
ANKRD28-203ENST00000439830 H0YCG3 227 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 I3L4J1 428 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 PODXLO00592 558 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 NARSO43776 548 aaKnown RBP27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 LAMP2P13473 410 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 FSHRP23945 695 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 UBA7P41226 1012 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 BRCC3P46736 316 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 CLCN5P51795 746 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 CWF19L1Q69YN2 538 aaKnown RBP27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 BRAPQ7Z569 592 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 GRASPQ7Z6J2 395 aaPredicted RBP27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 FLCNQ8NFG4 579 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 SLC7A14Q8TBB6 771 aa27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 ZBTB45Q96K62 511 aaPredicted RBP27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 ZFP37Q9Y6Q3 630 aaPredicted RBP27.59■■■□□ 2.01
ANKRD28-203ENST00000439830 CCL16O15467 120 aa27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 XYLBO75191 536 aa27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 CACNB1Q02641 598 aaPredicted RBP27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 AXDND1Q5T1B0 1012 aaPredicted RBP27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 ODF2LQ9ULJ1 636 aa27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 POLIQ9UNA4 740 aa27.58■■■□□ 2.01
ANKRD28-203ENST00000439830 ANK1P16157 1881 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 USP34Q70CQ2 3546 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 NPHP3-ACAD11A0A0J9YXS1 232 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 POU2F2P09086 479 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 UVSSAQ2YD98 709 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 SIX5Q8N196 739 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 SLC44A3Q8N4M1 653 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 FAM86C1Q9NVL1 165 aa27.57■■■□□ 2
ANKRD28-203ENST00000439830 CLDN3O15551 220 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 CFHP08603 1231 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 SRFP11831 508 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 RPL9P32969 192 aaKnown RBP27.56■■■□□ 2
ANKRD28-203ENST00000439830 MATR3P43243 847 aaKnown RBP eCLIP27.56■■■□□ 22e-6■■■■□ 22.8
ANKRD28-203ENST00000439830 NCKAP1LP55160 1127 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 HTR4Q13639 388 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 ARSHQ5FYA8 562 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 RSPO2Q6UXX9 243 aaPredicted RBP27.56■■■□□ 2
ANKRD28-203ENST00000439830 RTL10Q7L3V2 364 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 GPBP1Q86WP2 473 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 RASSF8Q8NHQ8 419 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 ATOH1Q92858 354 aaPredicted RBP27.56■■■□□ 2
ANKRD28-203ENST00000439830 BICD1Q96G01 975 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 REEP2Q9BRK0 252 aa27.56■■■□□ 2
ANKRD28-203ENST00000439830 WNT16Q9UBV4 365 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms