RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 MFAP3P55082 362 aa23.82■■□□□ 1.4
VSX1-205ENST00000429762 KLHDC9Q8NEP7 349 aa23.82■■□□□ 1.4
VSX1-205ENST00000429762 LNX1Q8TBB1 728 aaPredicted RBP23.82■■□□□ 1.4
VSX1-205ENST00000429762 SLC20A1Q8WUM9 679 aa23.82■■□□□ 1.4
VSX1-205ENST00000429762 C1orf112Q9NSG2 853 aa23.82■■□□□ 1.4
VSX1-205ENST00000429762 GTF2IRD1Q9UHL9 959 aa23.82■■□□□ 1.4
VSX1-205ENST00000429762 BZW2Q9Y6E2 419 aaKnown RBP23.82■■□□□ 1.4
VSX1-205ENST00000429762 DDX3XO00571 662 aaKnown RBP eCLIP23.81■■□□□ 1.4
VSX1-205ENST00000429762 CALCAP01258 141 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 GNAT1P11488 350 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 HOXA11P31270 313 aaPredicted RBP23.81■■□□□ 1.4
VSX1-205ENST00000429762 CASQ1P31415 396 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 SNX17Q15036 470 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 ERO1AQ96HE7 468 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 DDX20Q9UHI6 824 aaKnown RBP23.81■■□□□ 1.4
VSX1-205ENST00000429762 DAAM1Q9Y4D1 1078 aa23.81■■□□□ 1.4
VSX1-205ENST00000429762 A0A1B0GUA9 196 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 LACTBL1A8MY62 500 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 CST3P01034 146 aaPredicted RBP23.8■■□□□ 1.4
VSX1-205ENST00000429762 INHAP05111 366 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 NFICP08651 508 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 NCOA4Q13772 614 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 WDR44Q5JSH3 913 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 TRAPPC11Q7Z392 1133 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 EIF2AQ9BY44 585 aaKnown RBP23.8■■□□□ 1.4
VSX1-205ENST00000429762 CYP26A1O43174 497 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 SGPL1O95470 568 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 NKX3-2P78367 333 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 KIF5AQ12840 1032 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 CCSAPQ6IQ19 270 aaPredicted RBP23.8■■□□□ 1.4
VSX1-205ENST00000429762 GLYCTKQ8IVS8 523 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 U2AF1L4Q8WU68 220 aaKnown RBP23.8■■□□□ 1.4
VSX1-205ENST00000429762 SHC3Q92529 594 aa23.8■■□□□ 1.4
VSX1-205ENST00000429762 BRCA2P51587 3418 aa23.79■■□□□ 1.4
VSX1-205ENST00000429762 CLTAP09496 248 aa23.79■■□□□ 1.4
VSX1-205ENST00000429762 EIF4BP23588 611 aaKnown RBP23.79■■□□□ 1.4
VSX1-205ENST00000429762 SEPT11Q9NVA2 429 aaKnown RBP23.79■■□□□ 1.4
VSX1-205ENST00000429762 NUB1Q9Y5A7 615 aa23.79■■□□□ 1.4
VSX1-205ENST00000429762 GRIN2DO15399 1336 aa23.79■■□□□ 1.4
VSX1-205ENST00000429762 KRT86O43790 486 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 TMEM191BP0C7N4 346 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 MYL6P60660 151 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 DUOXA2Q1HG44 320 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 JADE1Q6IE81 842 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 FAM71AQ8IYT1 594 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 ADPGKQ9BRR6 497 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 SYT11Q9BT88 431 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 CXCL16Q9H2A7 254 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 SALL4Q9UJQ4 1053 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 NAGPAQ9UK23 515 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 TMCO5BA8MYB1 307 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 ZC3H11AO75152 810 aaKnown RBP eCLIP23.78■■□□□ 1.4
VSX1-205ENST00000429762 TUBB4AP04350 444 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 CTSHP09668 335 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 KRT5P13647 590 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 CDC42EP1Q00587 391 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 SURF1Q15526 300 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 SLC10A6Q3KNW5 377 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 TAF3Q5VWG9 929 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 ZNF662Q6ZS27 426 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 SLC47A2Q86VL8 602 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 PALB2Q86YC2 1186 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 HES2Q9Y543 173 aa23.78■■□□□ 1.4
VSX1-205ENST00000429762 URI1O94763 535 aaPredicted RBP23.77■■□□□ 1.4
VSX1-205ENST00000429762 MOCS3O95396 460 aa23.77■■□□□ 1.4
VSX1-205ENST00000429762 NOP14P78316 857 aaKnown RBP23.77■■□□□ 1.4
VSX1-205ENST00000429762 VTI1AQ96AJ9 217 aa23.77■■□□□ 1.4
VSX1-205ENST00000429762 NENFQ9UMX5 172 aa23.77■■□□□ 1.4
VSX1-205ENST00000429762 PIN4Q9Y237 131 aaKnown RBP23.77■■□□□ 1.4
VSX1-205ENST00000429762 PTCH2Q9Y6C5 1203 aa23.77■■□□□ 1.4
VSX1-205ENST00000429762 B4GALT4O60513 344 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 IL18RAPO95256 599 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 GUCY2FP51841 1108 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 ALKBH5Q6P6C2 394 aaKnown RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 NOP9Q86U38 636 aaKnown RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 VPS36Q86VN1 386 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 PXYLP1Q8TE99 480 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 AGPAT1Q99943 283 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 RNF19AQ9NV58 838 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 CDY2AQ9Y6F7 541 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 TNNC2P02585 160 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 TNFAIP3P21580 790 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 CRYBB1P53674 252 aaPredicted RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 GCNT1Q02742 428 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 RPUSD2Q8IZ73 545 aaKnown RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 SLC30A5Q8TAD4 765 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 SECISBP2LQ93073 1101 aaKnown RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 ANKRD36BP1Q96IX9 119 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 APOL6Q9BWW8 343 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 CELF4Q9BZC1 486 aaKnown RBP23.76■■□□□ 1.39
VSX1-205ENST00000429762 TSGA10Q9BZW7 698 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 SNTG2Q9NY99 539 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 TAS2R14Q9NYV8 317 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 TRIM17Q9Y577 477 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 MROH7Q68CQ1 1323 aa23.76■■□□□ 1.39
VSX1-205ENST00000429762 PJA2O43164 708 aa23.75■■□□□ 1.39
VSX1-205ENST00000429762 BUB1O43683 1085 aa23.75■■□□□ 1.39
VSX1-205ENST00000429762 CCDC172P0C7W6 258 aa23.75■■□□□ 1.39
VSX1-205ENST00000429762 CST5P28325 142 aaPredicted RBP23.75■■□□□ 1.39
VSX1-205ENST00000429762 AP3M2P53677 418 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms