RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 KRT18P05783 430 aaKnown RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 IGFBP6P24592 240 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 TKTP29401 623 aaKnown RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 GRM5P41594 1212 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 BRCC3P46736 316 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 ATP2C1P98194 919 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 NAB2Q15742 525 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 AXDND1Q5T1B0 1012 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 MPZL3Q6UWV2 235 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 ZBTB45Q96K62 511 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 UROC1Q96N76 676 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 PPP1R10Q96QC0 940 aaKnown RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 IRF2BPLQ9H1B7 796 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 TMEM134Q9H6X4 195 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
TTC3-208ENST00000428693 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 MYH11P35749 1972 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 PODXLO00592 558 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 MCF2P10911 925 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 PLS3P13797 630 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 ELF1P32519 619 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 UBA7P41226 1012 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 SOX4Q06945 474 aaPredicted RBP13.16□□□□□ -0.3
TTC3-208ENST00000428693 MAPK7Q13164 816 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 UPP1Q16831 310 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 TAS1R3Q7RTX0 852 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 SLC44A3Q8N4M1 653 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
TTC3-208ENST00000428693 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 TIPINQ9BVW5 301 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 C17orf75Q9HAS0 396 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 SLC38A7Q9NVC3 462 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 EPS15L1Q9UBC2 864 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 DOCK6Q96HP0 2047 aa13.16□□□□□ -0.3
TTC3-208ENST00000428693 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
TTC3-208ENST00000428693 HNRNPA1P09651 372 aaKnown RBP eCLIP13.15□□□□□ -0.3
TTC3-208ENST00000428693 LAMP2P13473 410 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 FGFR3P22607 806 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 MCM2P49736 904 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 SPAG1Q07617 926 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 NOLC1Q14978 699 aaKnown RBP eCLIP13.15□□□□□ -0.3
TTC3-208ENST00000428693 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 SYT2Q8N9I0 419 aaPredicted RBP13.15□□□□□ -0.3
TTC3-208ENST00000428693 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
TTC3-208ENST00000428693 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 NUMBLQ9Y6R0 609 aa13.15□□□□□ -0.3
TTC3-208ENST00000428693 ZFHX2Q9C0A1 2572 aaPredicted RBP13.15□□□□□ -0.3
TTC3-208ENST00000428693 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 PRRG1O14668 218 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 CLDN3O15551 220 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 PI15O43692 258 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 GFRA3O60609 400 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 TOM1L1O75674 476 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 FAM13AO94988 1023 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 C1RP00736 705 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 MCM4P33991 863 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 CLCN5P51795 746 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 SPECC1Q5M775 1068 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 GPR152Q8TDT2 470 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 SPIRE2Q8WWL2 714 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 ING5Q8WYH8 240 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 SNX27Q96L92 541 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 ZMAT2Q96NC0 199 aaKnown RBP13.14□□□□□ -0.31
TTC3-208ENST00000428693 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 PTPRHQ9HD43 1115 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 HCFC1R1Q9NWW0 138 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 LARSQ9P2J5 1176 aaKnown RBP13.14□□□□□ -0.31
TTC3-208ENST00000428693 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 CDH7Q9ULB5 785 aa13.14□□□□□ -0.31
TTC3-208ENST00000428693 CITO14578 2027 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 DOCK8Q8NF50 2099 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 K7ENM7 598 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 LRG1P02750 347 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 ATXN8OSP0DMR3 200 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 CXCL8P10145 99 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 SRFP11831 508 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 AOC1P19801 751 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
TTC3-208ENST00000428693 LIG4P49917 911 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 NUBP1P53384 320 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 SLC12A3P55017 1021 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 RAB33AQ14088 237 aa13.13□□□□□ -0.31
TTC3-208ENST00000428693 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms