RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 LACTBL1A8MY62 500 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 TGM5O43548 720 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 NR1I2O75469 434 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 PPP1R37O75864 691 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 PIGRP01833 764 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 CXCL8P10145 99 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 KCNE1P15382 129 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 CASP1P29466 404 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
GPC1-204ENST00000426280 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 SV2BQ7L1I2 683 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 ZNF720Q7Z2F6 126 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 GLIS3Q8NEA6 775 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 HPS3Q969F9 1004 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 EMILIN2Q9BXX0 1053 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 CNTN3Q9P232 1028 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 STK17AQ9UEE5 414 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 PCDHA7Q9UN72 937 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 BDP1A6H8Y1 2624 aa13.93□□□□□ -0.18
GPC1-204ENST00000426280 MYH11P35749 1972 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 TTC26A0AVF1 554 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 CLDN3O15551 220 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 PPP6R2O75170 966 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 B3GAT3O94766 335 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 FGFR3P22607 806 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 TKTP29401 623 aaKnown RBP13.92□□□□□ -0.18
GPC1-204ENST00000426280 YARSP54577 528 aaKnown RBP13.92□□□□□ -0.18
GPC1-204ENST00000426280 WNT7BP56706 349 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 NOLC1Q14978 699 aaKnown RBP eCLIP13.92□□□□□ -0.18
GPC1-204ENST00000426280 ZBTB6Q15916 424 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
GPC1-204ENST00000426280 KIAA1841Q6NSI8 718 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 GPR149Q86SP6 731 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 TMEM87AQ8NBN3 555 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 ZNF707Q96C28 371 aaPredicted RBP13.92□□□□□ -0.18
GPC1-204ENST00000426280 SMOC2Q9H3U7 446 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 MAN1C1Q9NR34 630 aa13.92□□□□□ -0.18
GPC1-204ENST00000426280 A0A0B4J269 797 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 PODXLO00592 558 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 PPEF2O14830 753 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 N4BP1O75113 896 aaKnown RBP13.91□□□□□ -0.18
GPC1-204ENST00000426280 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
GPC1-204ENST00000426280 YEATS4O95619 227 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 ADSSP30520 456 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 MATR3P43243 847 aaKnown RBP eCLIP13.91□□□□□ -0.18
GPC1-204ENST00000426280 LIG4P49917 911 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 NUCB2P80303 420 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 ITIH3Q06033 890 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 TPRNQ4KMQ1 711 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 CRELD2Q6UXH1 353 aaPredicted RBP13.91□□□□□ -0.18
GPC1-204ENST00000426280 PPFIBP1Q86W92 1011 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 MAP4K3Q8IVH8 894 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 BICD1Q96G01 975 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 FAM84AQ96KN4 292 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 TTPALQ9BTX7 342 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 ST6GALNAC4Q9H4F1 302 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 VWA8A3KMH1 1905 aa13.91□□□□□ -0.18
GPC1-204ENST00000426280 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPC1-204ENST00000426280 CCDC195A0A1B0GUA6 201 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 FSD2A1L4K1 749 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 DCXO43602 365 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 GPR37L1O60883 481 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 CUTAO60888 179 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 ADRB2P07550 413 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 CLTAP09496 248 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 SRGAP2BP0DMP2 458 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 COL9A1P20849 921 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 STAT6P42226 847 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 ACOT2P49753 483 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 PSMD5Q16401 504 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
GPC1-204ENST00000426280 ATAT1Q5SQI0 421 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 CCDC73Q6ZRK6 1079 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 ST13P5Q8NFI4 369 aaPredicted RBP13.9□□□□□ -0.18
GPC1-204ENST00000426280 DHX58Q96C10 678 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
GPC1-204ENST00000426280 TOPORSQ9NS56 1045 aaPredicted RBP13.9□□□□□ -0.18
GPC1-204ENST00000426280 DZANK1Q9NVP4 752 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 KCNG1Q9UIX4 513 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
GPC1-204ENST00000426280 RCOR1Q9UKL0 485 aa13.9□□□□□ -0.18
GPC1-204ENST00000426280 HNRNPDLO14979 420 aaKnown RBP13.89□□□□□ -0.19
GPC1-204ENST00000426280 OGTO15294 1046 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 TBC1D4O60343 1298 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
GPC1-204ENST00000426280 GLUD1P00367 558 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 ADH1AP07327 375 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 IDEP14735 1019 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 HOXD13P35453 343 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
GPC1-204ENST00000426280 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms