RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 ELMOD1Q8N336 334 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 MCRS1Q96EZ8 462 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 RAB34Q9BZG1 259 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 DLGAP2Q9P1A6 1054 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 MRPS17Q9Y2R5 130 aaKnown RBP17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 NUB1Q9Y5A7 615 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 MYO15AQ9UKN7 3530 aa17.11■□□□□ 0.33
SBDSP1-201ENST00000415772 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 LRRN2O75325 713 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 POU2F2P09086 479 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 PTPN2P17706 415 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 MUTP22033 750 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 TKTP29401 623 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 NPAS3Q8IXF0 933 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 DDX27Q96GQ7 796 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 BORCS6Q96GS4 357 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 NELL2Q99435 816 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 KIFC3Q9BVG8 833 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 BHMT2Q9H2M3 363 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 DNMT3BQ9UBC3 853 aaKnown RBP17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 LRWD1Q9UFC0 647 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 FBXO4Q9UKT5 387 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
SBDSP1-201ENST00000415772 H7C4K7 107 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 I3L4J1 428 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 SPTLC1O15269 473 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 CD72P21854 359 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 OSTNP61366 133 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 PUM1Q14671 1186 aaKnown RBP eCLIP17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 NAB2Q15742 525 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 TTC38Q5R3I4 469 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 OSBPL6Q9BZF3 934 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 GDE1Q9NZC3 331 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 PHLPP2Q6ZVD8 1323 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 MYH15Q9Y2K3 1946 aa17.09■□□□□ 0.33
SBDSP1-201ENST00000415772 ZNF197O14709 1029 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 ECI2O75521 394 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 RHOP08100 348 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 GLULP15104 373 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 BRCC3P46736 316 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 UPP1Q16831 310 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 ZNF528Q3MIS6 628 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 ZNF852Q6ZMS4 543 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 SNX29Q8TEQ0 813 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 CORO1BQ9BR76 489 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 CYP4F11Q9HBI6 524 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 LTB4R2Q9NPC1 389 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 DDX19AQ9NUU7 478 aaKnown RBP17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 TNFSF13BQ9Y275 285 aa17.08■□□□□ 0.32
SBDSP1-201ENST00000415772 SMIM28A0A1B0GU29 152 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 SEC24BO95487 1268 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 HARSP12081 509 aaKnown RBP17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 GRM5P41594 1212 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 PEX3P56589 373 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 DMP1Q13316 513 aaPredicted RBP17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 PPP2R5DQ14738 602 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 CYP4A22Q5TCH4 519 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 NT5DC1Q5TFE4 455 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 IQCEQ6IPM2 695 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 PDZD4Q76G19 769 aaPredicted RBP17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 DCLK2Q8N568 766 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 MRPL4Q9BYD3 311 aaKnown RBP17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 FOXP1Q9H334 677 aaPredicted RBP17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 BRD9Q9H8M2 597 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 KMT5AQ9NQR1 393 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 DNM3Q9UQ16 869 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 PCDHGA2Q9Y5H1 932 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
SBDSP1-201ENST00000415772 DOCK8Q8NF50 2099 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 PODXLO00592 558 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 EDN1P05305 212 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 ROR1Q01973 937 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 STRN3Q13033 797 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 VARS2Q5ST30 1063 aaKnown RBP17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 CCDC83Q8IWF9 413 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 DDX23Q9BUQ8 820 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms