RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ZNF516Q92618 1163 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 EPN1Q9Y6I3 576 aaPredicted RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 USP27XA6NNY8 438 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 AKR1B10O60218 316 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 CCDC172P0C7W6 258 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 COL6A1P12109 1028 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 MFAP3P55082 362 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 PTPN11Q06124 597 aaPredicted RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 DRAP1Q14919 205 aaPredicted RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 ZACNQ401N2 412 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TDRD10Q5VZ19 366 aaKnown RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 SEMA4DQ92854 862 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 ANKRD36BP1Q96IX9 119 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 FAM84AQ96KN4 292 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 C11orf49Q9H6J7 331 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 C1orf112Q9NSG2 853 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TRMT13Q9NUP7 481 aaKnown RBP18.72■□□□□ 0.59
CLDN4-201ENST00000340958 SPTLC3Q9NUV7 552 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 GRIN2DO15399 1336 aa18.72■□□□□ 0.59
CLDN4-201ENST00000340958 TRIP12Q14669 1992 aaPredicted RBP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 A0A1W2PQ45 241 aaPredicted RBP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 A0A1W2PQY0 241 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 NDUFA10O95299 355 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 C4BPAP04003 597 aaKnown RBP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 YARSP54577 528 aaKnown RBP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 SPA17Q15506 151 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 TMEM192Q8IY95 271 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 PPP1R13BQ96KQ4 1090 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 MTMR12Q9C0I1 747 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 AIPL1Q9NZN9 384 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 AJAP1Q9UKB5 411 aaPredicted RBP18.71■□□□□ 0.59
CLDN4-201ENST00000340958 PTPRJQ12913 1337 aa18.71■□□□□ 0.59
CLDN4-201ENST00000340958 LRRN2O75325 713 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 RPS6KA5O75582 802 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 GFPT2O94808 682 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 HLA-DRAP01903 254 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 PLEKP08567 350 aaPredicted RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 HOXA11P31270 313 aaPredicted RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 EIF4A3P38919 411 aaKnown RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 USP8P40818 1118 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 TRPC3Q13507 836 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 ARHGEF19Q8IW93 802 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 OR5B17Q8NGF7 314 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 C16orf45Q96MC5 204 aaPredicted RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 PI4K2AQ9BTU6 479 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 R3HCC1Q9Y3T6 440 aaKnown RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 BZW2Q9Y6E2 419 aaKnown RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 A0A0U1RQG5 324 aaPredicted RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 F8VZ95 297 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 ZC3H11AO75152 810 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 FERP16591 822 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 SOX5P35711 763 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 KRT83P78385 493 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 NFX1Q12986 1120 aaKnown RBP18.7■□□□□ 0.58
CLDN4-201ENST00000340958 PTK7Q13308 1070 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 C15orf39Q6ZRI6 1047 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 ACRBPQ8NEB7 543 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 KCND1Q9NSA2 647 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 ARHGAP20Q9P2F6 1191 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 ADGRG1Q9Y653 693 aa18.7■□□□□ 0.58
CLDN4-201ENST00000340958 GOLGA6L9A6NEM1 432 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 LACTBL1A8MY62 500 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 B4GALT4O60513 344 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 GRM5P41594 1212 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 JAM2P57087 298 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 NCOA4Q13772 614 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 TWF2Q6IBS0 349 aaKnown RBP18.69■□□□□ 0.58
CLDN4-201ENST00000340958 WNT8BQ93098 351 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 FAM81BQ96LP2 452 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 APOL6Q9BWW8 343 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
CLDN4-201ENST00000340958 SENP6Q9GZR1 1112 aaPredicted RBP18.69■□□□□ 0.58
CLDN4-201ENST00000340958 NOC2LQ9Y3T9 749 aaKnown RBP18.69■□□□□ 0.58
CLDN4-201ENST00000340958 CEP290O15078 2479 aa18.69■□□□□ 0.58
CLDN4-201ENST00000340958 MROH7Q68CQ1 1323 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 KRT19P08727 400 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 PNMA6AP0CW24 399 aaPredicted RBP18.68■□□□□ 0.58
CLDN4-201ENST00000340958 KIF11P52732 1056 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 POU5F1Q01860 360 aaKnown RBP18.68■□□□□ 0.58
CLDN4-201ENST00000340958 TRAPPC11Q7Z392 1133 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 KIAA1328Q86T90 577 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 RPAINQ86UA6 219 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 VPS36Q86VN1 386 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 FAM228AQ86W67 206 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 HTATIP2Q9BUP3 242 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 ASB7Q9H672 318 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 HAUS4Q9H6D7 363 aa18.68■□□□□ 0.58
CLDN4-201ENST00000340958 SSU72P8A0A1W2PR75 194 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 GPR182O15218 404 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 CHRNA1P02708 482 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 ELMO3Q96BJ8 720 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 SNTG2Q9NY99 539 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 ST3GAL5Q9UNP4 418 aa18.67■□□□□ 0.58
CLDN4-201ENST00000340958 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms