RNA–Protein interactions for RNA: ENST00000336937.8

ATF3-201, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-201ENST00000336937 ZNF560Q96MR9 790 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 CHST7Q9NS84 486 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 EXOC1Q9NV70 894 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 MARCH5Q9NX47 278 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 CLDND1Q9NY35 253 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 DNAJB4Q9UDY4 337 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 CD207Q9UJ71 328 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 AGO2Q9UKV8 859 aaKnown RBP7.55□□□□□ -1.2
ATF3-201ENST00000336937 DSEQ9UL01 958 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 REV3LO60673 3130 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 ANK1P16157 1881 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
ATF3-201ENST00000336937 MTCL1Q9Y4B5 1905 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 DENND4AQ7Z401 1863 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 A0A087WWV3 80 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 A0A087X0B3 334 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SMIM28A0A1B0GU29 152 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 H7C4K7 107 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 FAM189A1O60320 539 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 DDHD2O94830 711 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 PAPLNO95428 1278 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 GLUD1P00367 558 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 KCNA5P22460 613 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 DNAJB1P25685 340 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 AP3M2P53677 418 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 CACNB1Q02641 598 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 FAM160A1Q05DH4 1040 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SMARCB1Q12824 385 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 ADAM15Q13444 863 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 KCNC3Q14003 757 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 KCNB1Q14721 858 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 TMEM132DQ14C87 1099 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 NAB2Q15742 525 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SMAD2Q15796 467 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 CCDC85BQ15834 202 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 FOXD4L5Q5VV16 416 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 ZNF280BQ86YH2 543 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 BRSK2Q8IWQ3 736 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 SPRYD3Q8NCJ5 442 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 LRRC15Q8TF66 581 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 FOXD4L4Q8WXT5 416 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 PPM1EQ8WY54 764 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 STAMQ92783 540 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 MSLNLQ96KJ4 702 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 TTPALQ9BTX7 342 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 RXFP1Q9HBX9 757 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 ZDHHC7Q9NXF8 308 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 CHMP5Q9NZZ3 219 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 CPSF3Q9UKF6 684 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 GDAQ9Y2T3 454 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 PRG3Q9Y2Y8 225 aaPredicted RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
ATF3-201ENST00000336937 NR2E1Q9Y466 385 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 NUB1Q9Y5A7 615 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 BACE2Q9Y5Z0 518 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 HCFC2Q9Y5Z7 792 aa7.54□□□□□ -1.2
ATF3-201ENST00000336937 NPHP3-ACAD11A0A0J9YXS1 232 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 SPDYE4A6NLX3 237 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 TTLL13PA6NNM8 815 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 PODXLO00592 558 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 EXTL3O43909 919 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 RHOBTB3O94955 611 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 KIF4AO95239 1232 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 SMC2O95347 1197 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 CXCL14O95715 111 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 EDN1P05305 212 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 CXCL8P10145 99 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 ODC1P11926 461 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 HARSP12081 509 aaKnown RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 NMT1P30419 496 aaKnown RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 CA8P35219 290 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 IRS1P35568 1242 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 MTHFRP42898 656 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 ERVFC1P60507 584 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 NFIL3Q16649 462 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 KNOP1Q1ED39 458 aaKnown RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 UVSSAQ2YD98 709 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 LONRF3Q496Y0 759 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 LIN9Q5TKA1 542 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 SPATA1Q5VX52 437 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 ZNF280DQ6N043 979 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 EPM2AIP1Q7L775 607 aaPredicted RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 ZBTB33Q86T24 672 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 CDR2LQ86X02 465 aaPredicted RBP7.53□□□□□ -1.2
ATF3-201ENST00000336937 SLC9A9Q8IVB4 645 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 ADHFE1Q8IWW8 467 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 GPD1LQ8N335 351 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 LRRC52Q8N7C0 313 aa7.53□□□□□ -1.2
ATF3-201ENST00000336937 CEP120Q8N960 986 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms