RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CAND2O75155 1236 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 NPR1P16066 1061 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 OSBPP22059 807 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 ATICP31939 592 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 FASTKD1Q53R41 847 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 SNRNP48Q6IEG0 339 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 NOP9Q86U38 636 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 PSPC1Q8WXF1 523 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 NSUN4Q96CB9 384 aaKnown RBP17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 TMEM117Q9H0C3 514 aa17.36■□□□□ 0.37
SH3RF1-201ENST00000284637 SESN2P58004 480 aaPredicted RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 CAPRIN1Q14444 709 aaKnown RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ZNF513Q8N8E2 541 aaPredicted RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 TTC8Q8TAM2 541 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ISCUQ9H1K1 167 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 MRPL40Q9NQ50 206 aaKnown RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 FAM217BQ9NTX9 383 aaPredicted RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 NEU2Q9Y3R4 380 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ASAP2O43150 1006 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 SNX2O60749 519 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 RPS6KA4O75676 772 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 SLC1A1P43005 524 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ERVK-24P63145 666 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 SLC29A2Q14542 456 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 DPY19L2Q6NUT2 758 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ACAP3Q96P50 834 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 RNF146Q9NTX7 359 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 FEM1BQ9UK73 627 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 PDS5AQ29RF7 1337 aaKnown RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 SLC16A3O15427 465 aaKnown RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 PDE5AO76074 875 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 MYBP10242 640 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 SFNP31947 248 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 LRRC8EQ6NSJ5 796 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 NSUN6Q8TEA1 469 aaKnown RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 CARD9Q9H257 536 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ZNF302Q9NR11 478 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 CHORDC1Q9UHD1 332 aaPredicted RBP17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 CHMP2BQ9UQN3 213 aa17.35■□□□□ 0.37
SH3RF1-201ENST00000284637 ADCY3O60266 1144 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 SEC24DO94855 1032 aaPredicted RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 CDKL3Q8IVW4 592 aaPredicted RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 OPTNQ96CV9 577 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 STX18Q9P2W9 335 aaKnown RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ADGRL3Q9HAR2 1447 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ATMINO43313 823 aaPredicted RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 EPHA7Q15375 998 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 CNGA3Q16281 694 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 FRA10AC1Q70Z53 315 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ERP44Q9BS26 406 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 HSPBP1Q9NZL4 362 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 UVRAGQ9P2Y5 699 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 HPS5Q9UPZ3 1129 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 DUSP10Q9Y6W6 482 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 NRKQ7Z2Y5 1582 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ATP9BO43861 1147 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 AP1G2O75843 785 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 COMTP21964 271 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 NME3Q13232 169 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ZCWPW2Q504Y3 356 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 GCOM2Q9BZD3 368 aaPredicted RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 EPB41L4AQ9HCS5 686 aaPredicted RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 HACD3Q9P035 362 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 PIK3R2O00459 728 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 SUPT3HO75486 399 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ESRRBO95718 433 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 BAG6P46379 1132 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ACTR2P61160 394 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 PDCD6IPQ8WUM4 868 aaKnown RBP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ALG6Q9Y672 507 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ATP8B3O60423 1300 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ABCA8O94911 1581 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 HUS1O60921 280 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 APRTP07741 180 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 ANXA13P27216 316 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 HSD17B3P37058 310 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 AARSP49588 968 aaKnown RBP eCLIP17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 DNAL1Q4LDG9 190 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 CEP55Q53EZ4 464 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 TRIM65Q6PJ69 517 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 FUKQ8N0W3 1084 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 KIFC3Q9BVG8 833 aa17.34■□□□□ 0.37
SH3RF1-201ENST00000284637 KRT75O95678 551 aa17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 ADORA2BP29275 332 aa17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 BARGINQ6ZT62 677 aa17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 SARS2Q9NP81 518 aaKnown RBP17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 NARFQ9UHQ1 456 aa17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 CRB1P82279 1406 aa17.33■□□□□ 0.37
SH3RF1-201ENST00000284637 NEMP1O14524 444 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 KIAA1841Q6NSI8 718 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 SYDE1Q6ZW31 735 aaPredicted RBP17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 LRRC34Q8IZ02 419 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 OR6P1Q8NGX9 317 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 FAM167AQ96KS9 214 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 THTPAQ9BU02 230 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 AURKCQ9UQB9 309 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms