RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GUCY1B2O75343 617 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 RALAP11233 206 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 ITGAXP20702 1163 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 MTMR1Q13613 665 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 C11orf88Q6PI97 169 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 KLHL17Q6TDP4 642 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 USP33Q8TEY7 942 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 MPP4Q96JB8 637 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 SEC16BQ96JE7 1060 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 TINF2Q9BSI4 451 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 V9GYQ6 96 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 AATKQ6ZMQ8 1374 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 PIPSLA2A3N6 862 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 SCRN1Q12765 414 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 APOBEC3FQ8IUX4 373 aaKnown RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 GRAMD1AQ96CP6 724 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 ACCSQ96QU6 501 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 UBE2OQ9C0C9 1292 aaKnown RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 OSGEPL1Q9H4B0 414 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 GMFGO60234 142 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 KRT38O76015 456 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 ERVK-10P10266 1014 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 ATP6V1C1P21283 382 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 IFNL3Q8IZI9 196 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 AGGF1Q8N302 714 aaeCLIP11.66□□□□□ -0.54
MSH6-201ENST00000234420 TMC2Q8TDI7 906 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 UBASH3BQ8TF42 649 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 VPS39Q96JC1 886 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 PNKPQ96T60 521 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 KCNQ3O43525 872 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 SGSM1Q2NKQ1 1148 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 EFHBQ8N7U6 833 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 MYH10P35580 1976 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 ARAP3Q8WWN8 1544 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 PDGFRBP09619 1106 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 CDC27P30260 824 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 VHLP40337 213 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 MDH1P40925 334 aaKnown RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 IFNEQ86WN2 208 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 GRAMD1CQ8IYS0 662 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 C20orf96Q9NUD7 363 aaPredicted RBP11.66□□□□□ -0.54
MSH6-201ENST00000234420 ZNF212Q9UDV6 495 aa11.66□□□□□ -0.54
MSH6-201ENST00000234420 IGF2BP3O00425 579 aaKnown RBP eCLIP11.65□□□□□ -0.54
MSH6-201ENST00000234420 DYNC1LI2O43237 492 aaPredicted RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 LCA5LO95447 670 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 ARL4CP56559 192 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 ALDH6A1Q02252 535 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 NR5A1Q13285 461 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 ERAP2Q6P179 960 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 C19orf60Q96EN9 201 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 HES6Q96HZ4 224 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 PI4KBQ9UBF8 816 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 MTRF1O75570 445 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 PCDH8O95206 1070 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 AKAP5P24588 427 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 CRKP46108 304 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 GPC3P51654 580 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 NCALDP61601 193 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 DSG1Q02413 1049 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 OOSP2Q86WS3 158 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 BEST2Q8NFU1 509 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 OR6P1Q8NGX9 317 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 CALML6Q8TD86 181 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 AMNQ9BXJ7 453 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 IKBKBO14920 756 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 PPP1R37O75864 691 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SERPING1P05155 500 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 NR2F2P24468 414 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 KRT76Q01546 638 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SREBF2Q12772 1141 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 NR1H3Q13133 447 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 ARHGEF7Q14155 803 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
MSH6-201ENST00000234420 DDX18Q9NVP1 670 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 AIPL1Q9NZN9 384 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 FLT4P35916 1363 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 CYTH3O43739 400 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 SOX6P35712 828 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 GPSM2P81274 684 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 KPNB1Q14974 876 aaKnown RBP11.65□□□□□ -0.54
MSH6-201ENST00000234420 C16orf62Q7Z3J2 963 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 CYLDQ9NQC7 956 aa11.65□□□□□ -0.54
MSH6-201ENST00000234420 H0YCG3 227 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.556e-7■■□□□ 13.3
MSH6-201ENST00000234420 SYNCRIPO60506 623 aaKnown RBP11.65□□□□□ -0.55
MSH6-201ENST00000234420 NDUFS2O75306 463 aa11.65□□□□□ -0.55
MSH6-201ENST00000234420 OR52Z1P0C646 297 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms