RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 SPC3Q12133 184 aa2.09□□□□□ -2.07
snR43snR43 MSS18P08593 268 aa2.08□□□□□ -2.08
snR43snR43 NFT1P0CE68 1218 aa2.08□□□□□ -2.08
snR43snR43 MRPS28P21771 286 aa2.08□□□□□ -2.08
snR43snR43 CMK2P22517 447 aa2.08□□□□□ -2.08
snR43snR43 HXT2P23585 541 aa2.08□□□□□ -2.08
snR43snR43 RRP7P25368 297 aaPredicted RBP2.08□□□□□ -2.08
snR43snR43 PEX3P28795 441 aa2.08□□□□□ -2.08
snR43snR43 DEG1P31115 442 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 REC114P32841 428 aa2.08□□□□□ -2.08
snR43snR43 GDH2P33327 1092 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 MCH2P36032 473 aa2.08□□□□□ -2.08
snR43snR43 SRP102P36057 244 aaPredicted RBP2.08□□□□□ -2.08
snR43snR43 SKG1P36169 355 aa2.08□□□□□ -2.08
snR43snR43 ARC40P38328 384 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 RMD6P39975 231 aa2.08□□□□□ -2.08
snR43snR43 DDI1P40087 428 aa2.08□□□□□ -2.08
snR43snR43 PUG1P40100 303 aa2.08□□□□□ -2.08
snR43snR43 QRI7P43122 407 aa2.08□□□□□ -2.08
snR43snR43 CIN2P46670 268 aa2.08□□□□□ -2.08
snR43snR43 MIG2P53035 382 aa2.08□□□□□ -2.08
snR43snR43 NSA1P53136 463 aaPredicted RBP2.08□□□□□ -2.08
snR43snR43 RMD9P53140 646 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 YGR168CP53293 376 aa2.08□□□□□ -2.08
snR43snR43 RRN9P53437 365 aa2.08□□□□□ -2.08
snR43snR43 ATP23P53722 227 aa2.08□□□□□ -2.08
snR43snR43 WSC2P53832 503 aa2.08□□□□□ -2.08
snR43snR43 GTR1Q00582 310 aa2.08□□□□□ -2.08
snR43snR43 SPR6Q01684 191 aa2.08□□□□□ -2.08
snR43snR43 NUP49Q02199 472 aa2.08□□□□□ -2.08
snR43snR43 DIG2Q03373 323 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 YMR166CQ03829 368 aa2.08□□□□□ -2.08
snR43snR43 UTP15Q04305 513 aaKnown RBP2.08□□□□□ -2.08
snR43snR43 NNT1Q05874 261 aa2.08□□□□□ -2.08
snR43snR43 YPR098CQ06089 161 aa2.08□□□□□ -2.08
snR43snR43 ARR2Q06597 130 aa2.08□□□□□ -2.08
snR43snR43 YDL009CQ12210 107 aa2.08□□□□□ -2.08
snR43snR43 NFI1Q12216 726 aa2.08□□□□□ -2.08
snR43snR43 YNL162W-AQ3E7A8 72 aa2.08□□□□□ -2.08
snR43snR43 YKL068W-AQ3E826 78 aa2.08□□□□□ -2.08
snR43snR43 YMR105W-AQ8TGS8 64 aa2.08□□□□□ -2.08
snR43snR43 YER175W-AQ8TGU4 54 aa2.08□□□□□ -2.08
snR43snR43 MES1P00958 751 aaKnown RBP2.07□□□□□ -2.08
snR43snR43 AAC1P04710 309 aa2.07□□□□□ -2.08
snR43snR43 RPC40P07703 335 aaKnown RBP2.07□□□□□ -2.08
snR43snR43 NAM2P11325 894 aa2.07□□□□□ -2.08
snR43snR43 MEK1P24719 497 aaPredicted RBP2.07□□□□□ -2.08
snR43snR43 CDC10P25342 322 aaKnown RBP2.07□□□□□ -2.08
snR43snR43 MIG1P27705 504 aa2.07□□□□□ -2.08
snR43snR43 RPC34P32910 317 aa2.07□□□□□ -2.08
snR43snR43 CTK2P46962 323 aa2.07□□□□□ -2.08
snR43snR43 GON7P46984 123 aa2.07□□□□□ -2.08
snR43snR43 XPT1P47165 209 aa2.07□□□□□ -2.08
snR43snR43 USE1P53146 245 aa2.07□□□□□ -2.08
snR43snR43 RNH201P53942 307 aa2.07□□□□□ -2.08
snR43snR43 SUB1P54000 292 aaKnown RBP2.07□□□□□ -2.08
snR43snR43 ABZ2Q03266 374 aa2.07□□□□□ -2.08
snR43snR43 GPI17Q04080 534 aa2.07□□□□□ -2.08
snR43snR43 PEX12Q04370 399 aa2.07□□□□□ -2.08
snR43snR43 RRP9Q06506 573 aaKnown RBP2.07□□□□□ -2.08
snR43snR43 RFU1Q08003 200 aa2.07□□□□□ -2.08
snR43snR43 YOR289WQ12012 251 aaPredicted RBP2.07□□□□□ -2.08
snR43snR43 YOR029WQ12243 111 aa2.07□□□□□ -2.08
snR43snR43 YDL007C-AQ2V2Q0 85 aa2.07□□□□□ -2.08
snR43snR43 SIR2P06700 562 aa2.06□□□□□ -2.08
snR43snR43 SGA1P08019 549 aa2.06□□□□□ -2.08
snR43snR43 STE18P18852 110 aa2.06□□□□□ -2.08
snR43snR43 SNF6P18888 332 aa2.06□□□□□ -2.08
snR43snR43 SAG1P20840 650 aa2.06□□□□□ -2.08
snR43snR43 CPR2P23285 205 aa2.06□□□□□ -2.08
snR43snR43 CLB4P24871 460 aa2.06□□□□□ -2.08
snR43snR43 KRR1P25586 316 aaPredicted RBP2.06□□□□□ -2.08
snR43snR43 LTV1P34078 463 aa2.06□□□□□ -2.08
snR43snR43 SOR1P35497 357 aaKnown RBP2.06□□□□□ -2.08
snR43snR43 ANR2P36090 516 aaPredicted RBP2.06□□□□□ -2.08
snR43snR43 HEK2P38199 381 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
snR43snR43 RTC2P38279 296 aa2.06□□□□□ -2.08
snR43snR43 PEX32P38292 413 aa2.06□□□□□ -2.08
snR43snR43 FZO1P38297 855 aa2.06□□□□□ -2.08
snR43snR43 IMD2P38697 523 aaKnown RBP2.06□□□□□ -2.08
snR43snR43 CHL4P38907 458 aa2.06□□□□□ -2.08
snR43snR43 PHO90P39535 881 aa2.06□□□□□ -2.08
snR43snR43 FIP1P45976 327 aa2.06□□□□□ -2.08
snR43snR43 TRS85P46944 698 aa2.06□□□□□ -2.08
snR43snR43 IMD3P50095 523 aaKnown RBP2.06□□□□□ -2.08
snR43snR43 YGL114WP53134 725 aa2.06□□□□□ -2.08
snR43snR43 GET1P53192 235 aa2.06□□□□□ -2.08
snR43snR43 GPI1P53306 609 aa2.06□□□□□ -2.08
snR43snR43 YNR048WP53740 393 aa2.06□□□□□ -2.08
snR43snR43 DSL1P53847 754 aa2.06□□□□□ -2.08
snR43snR43 YNL095CP53932 642 aa2.06□□□□□ -2.08
snR43snR43 YDR248CQ03786 193 aa2.06□□□□□ -2.08
snR43snR43 ELP6Q04868 273 aa2.06□□□□□ -2.08
snR43snR43 TRI1Q05024 226 aa2.06□□□□□ -2.08
snR43snR43 MLC2Q06580 163 aa2.06□□□□□ -2.08
snR43snR43 YDL242WQ07746 117 aa2.06□□□□□ -2.08
snR43snR43 SOR2Q07786 357 aa2.06□□□□□ -2.08
snR43snR43 GSH2Q08220 491 aa2.06□□□□□ -2.08
snR43snR43 FRE3Q08905 711 aa2.06□□□□□ -2.08
snR43snR43 THP3Q12049 470 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms