RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C HNT1Q04344 158 aaKnown RBP7.25□□□□□ -1.25
SRP54YPR088C YLR283WQ05867 314 aa7.25□□□□□ -1.25
SRP54YPR088C YLR031WQ07978 186 aa7.25□□□□□ -1.25
SRP54YPR088C RSC58Q07979 502 aa7.25□□□□□ -1.25
SRP54YPR088C YLR125WQ12138 136 aa7.25□□□□□ -1.25
SRP54YPR088C USB1Q12208 290 aaKnown RBP7.25□□□□□ -1.25
SRP54YPR088C IPP1P00817 287 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C RAD52P06778 471 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C NHP6BP11633 99 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C RNA14P25298 677 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C YCP4P25349 247 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C ATG15P25641 520 aa7.24□□□□□ -1.25
SRP54YPR088C ARO4P32449 370 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C MTC7P32633 139 aa7.24□□□□□ -1.25
SRP54YPR088C PPQ1P32945 549 aa7.24□□□□□ -1.25
SRP54YPR088C MRPS5P33759 307 aa7.24□□□□□ -1.25
SRP54YPR088C YER084WP40057 128 aa7.24□□□□□ -1.25
SRP54YPR088C QDR1P40475 563 aa7.24□□□□□ -1.25
SRP54YPR088C OTU1P43558 301 aa7.24□□□□□ -1.25
SRP54YPR088C AVT4P50944 713 aa7.24□□□□□ -1.25
SRP54YPR088C TY1A-DR2Q03964 440 aaKnown RBP7.24□□□□□ -1.25
SRP54YPR088C FOL3Q12676 427 aaPredicted RBP7.24□□□□□ -1.25
SRP54YPR088C TDH2P00358 332 aaKnown RBP7.23□□□□□ -1.25
SRP54YPR088C TCM62P38228 572 aaKnown RBP7.23□□□□□ -1.25
SRP54YPR088C ATF1P40353 525 aa7.23□□□□□ -1.25
SRP54YPR088C GPG1P53130 126 aa7.23□□□□□ -1.25
SRP54YPR088C GIM3P53900 129 aa7.23□□□□□ -1.25
SRP54YPR088C YDR391CQ04170 232 aa7.23□□□□□ -1.25
SRP54YPR088C COX17Q12287 69 aa7.23□□□□□ -1.25
SRP54YPR088C YBR056W-AI2HB52 66 aa7.23□□□□□ -1.25
SRP54YPR088C SAR1P20606 190 aaKnown RBP7.23□□□□□ -1.25
SRP54YPR088C RFA3P26755 122 aaKnown RBP7.23□□□□□ -1.25
SRP54YPR088C BOL3P39724 118 aa7.23□□□□□ -1.25
SRP54YPR088C MOB2P43563 287 aa7.23□□□□□ -1.25
SRP54YPR088C MRX9Q07349 420 aaKnown RBP7.23□□□□□ -1.25
SRP54YPR088C YOR385WQ08909 290 aa7.23□□□□□ -1.25
SRP54YPR088C RDI1Q12434 202 aa7.23□□□□□ -1.25
SRP54YPR088C RPL35AP0CX84 120 aaKnown RBP7.22□□□□□ -1.25
SRP54YPR088C RPL35BP0CX85 120 aaKnown RBP7.22□□□□□ -1.25
SRP54YPR088C VMA5P31412 392 aaKnown RBP7.22□□□□□ -1.25
SRP54YPR088C SEN34P39707 275 aa7.22□□□□□ -1.25
SRP54YPR088C NSA1P53136 463 aaPredicted RBP7.22□□□□□ -1.25
SRP54YPR088C ALG12P53730 551 aa7.22□□□□□ -1.25
SRP54YPR088C SPR28Q04921 423 aa7.22□□□□□ -1.25
SRP54YPR088C FIT3Q08907 204 aa7.22□□□□□ -1.25
SRP54YPR088C DEG1P31115 442 aaKnown RBP7.21□□□□□ -1.26
SRP54YPR088C GPI16P38875 610 aa7.21□□□□□ -1.26
SRP54YPR088C YND1P40009 630 aa7.21□□□□□ -1.26
SRP54YPR088C SIP18P50263 79 aa7.21□□□□□ -1.26
SRP54YPR088C RSM27P53305 110 aa7.21□□□□□ -1.26
SRP54YPR088C RFU1Q08003 200 aa7.21□□□□□ -1.26
SRP54YPR088C PRS5Q12265 496 aaKnown RBP7.21□□□□□ -1.26
SRP54YPR088C CDC28P00546 298 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C URA3P03962 267 aa7.2□□□□□ -1.26
SRP54YPR088C RPL6BP05739 176 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C ARO3P14843 370 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C GRX2P17695 143 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C HNM1P19807 563 aa7.2□□□□□ -1.26
SRP54YPR088C MAK32P23060 363 aa7.2□□□□□ -1.26
SRP54YPR088C YBL010CP32788 280 aa7.2□□□□□ -1.26
SRP54YPR088C REC114P32841 428 aa7.2□□□□□ -1.26
SRP54YPR088C FLO10P36170 1169 aa7.2□□□□□ -1.26
SRP54YPR088C MRPL27P36526 146 aaPredicted RBP7.2□□□□□ -1.26
SRP54YPR088C LSM1P47017 172 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C SKP1P52286 194 aa7.2□□□□□ -1.26
SRP54YPR088C YIP5P53108 310 aa7.2□□□□□ -1.26
SRP54YPR088C HAS1Q03532 505 aaKnown RBP7.2□□□□□ -1.26
SRP54YPR088C CRR1Q05790 422 aa7.2□□□□□ -1.26
SRP54YPR088C ERP4Q12450 207 aa7.2□□□□□ -1.26
SRP54YPR088C DIT1P21623 536 aa7.19□□□□□ -1.26
SRP54YPR088C VAM7P32912 316 aa7.19□□□□□ -1.26
SRP54YPR088C YKL063CP35725 167 aa7.19□□□□□ -1.26
SRP54YPR088C MCH2P36032 473 aa7.19□□□□□ -1.26
SRP54YPR088C UTP30P36144 274 aaKnown RBP7.19□□□□□ -1.26
SRP54YPR088C MRPL36P36531 177 aa7.19□□□□□ -1.26
SRP54YPR088C ARC40P38328 384 aaKnown RBP7.19□□□□□ -1.26
SRP54YPR088C GNA1P43577 159 aaPredicted RBP7.19□□□□□ -1.26
SRP54YPR088C TYW3P53177 273 aa7.19□□□□□ -1.26
SRP54YPR088C ARG5,6Q01217 863 aa7.19□□□□□ -1.26
SRP54YPR088C NGL2Q03264 515 aaKnown RBP7.19□□□□□ -1.26
SRP54YPR088C RPS31P05759 152 aaKnown RBP7.19□□□□□ -1.26
SRP54YPR088C IFM1P25038 676 aa7.19□□□□□ -1.26
SRP54YPR088C CLB6P32943 380 aa7.19□□□□□ -1.26
SRP54YPR088C FLX1P40464 311 aa7.19□□□□□ -1.26
SRP54YPR088C GTF1P53260 183 aaPredicted RBP7.19□□□□□ -1.26
SRP54YPR088C ACS1Q01574 713 aa7.19□□□□□ -1.26
SRP54YPR088C VBA1Q04301 562 aa7.19□□□□□ -1.26
SRP54YPR088C RRS1Q08746 203 aaKnown RBP7.19□□□□□ -1.26
SRP54YPR088C HUT1Q12520 339 aa7.19□□□□□ -1.26
SRP54YPR088C PRP8P33334 2413 aaKnown RBP7.18□□□□□ -1.26
SRP54YPR088C AAC1P04710 309 aa7.18□□□□□ -1.26
SRP54YPR088C MET3P08536 511 aa7.18□□□□□ -1.26
SRP54YPR088C SPS4P09937 338 aa7.18□□□□□ -1.26
SRP54YPR088C MSI1P13712 422 aa7.18□□□□□ -1.26
SRP54YPR088C SAG1P20840 650 aa7.18□□□□□ -1.26
SRP54YPR088C RFA1P22336 621 aaKnown RBP7.18□□□□□ -1.26
SRP54YPR088C CPR4P25334 318 aa7.18□□□□□ -1.26
SRP54YPR088C FMT1P32785 401 aa7.18□□□□□ -1.26
SRP54YPR088C ARO9P38840 513 aaPredicted RBP7.18□□□□□ -1.26
SRP54YPR088C OST1P41543 476 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms