RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	PHD1	P36093	366 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	FRM2	P37261	193 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	ECM14	P38836	430 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	YMR144W	P40214	342 aa	Known RBP	5.16	□□□□□ -1.58
TFB4	YPR056W	HPM1	P40481	377 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	IKS1	P47042	667 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	IMP4	P53941	290 aa	Known RBP	5.16	□□□□□ -1.58
TFB4	YPR056W	ODC1	Q03028	310 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	CTL1	Q03220	320 aa	Known RBP	5.16	□□□□□ -1.58
TFB4	YPR056W	GMC1	Q04399	608 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	NEJ1	Q06148	342 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	RDL1	Q12305	139 aa	Known RBP	5.16	□□□□□ -1.58
TFB4	YPR056W	YDL199C	Q12407	687 aa		5.16	□□□□□ -1.58
TFB4	YPR056W	SSN2	P38931	1420 aa		5.15	□□□□□ -1.58
TFB4	YPR056W	YAL064W-B	O13512	126 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	FCY2	P17064	533 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	OAC1	P32332	324 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	NVJ1	P38881	321 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	GLE2	P40066	365 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	ARK1	P53974	638 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	UBC7	Q02159	165 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	IRC15	Q02733	499 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	SPG4	Q04438	115 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	YPL225W	Q08971	146 aa	Known RBP	5.15	□□□□□ -1.59
TFB4	YPR056W	SLM3	Q12093	417 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	DRS2	P39524	1355 aa		5.15	□□□□□ -1.59
TFB4	YPR056W	YKR104W	P0CE69	306 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	YCR101C	P25607	182 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	OCH1	P31755	480 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	KTI12	P34253	313 aa	Known RBP	5.14	□□□□□ -1.59
TFB4	YPR056W	EGT2	P42835	1041 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	RBL2	P48606	106 aa	Known RBP	5.14	□□□□□ -1.59
TFB4	YPR056W	ARL3	Q02804	198 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	YML108W	Q03759	105 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	UTP15	Q04305	513 aa	Known RBP	5.14	□□□□□ -1.59
TFB4	YPR056W	THI20	Q08224	551 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	YGK3	Q12222	375 aa	Predicted RBP	5.14	□□□□□ -1.59
TFB4	YPR056W	PRM4	Q12498	284 aa		5.14	□□□□□ -1.59
TFB4	YPR056W	MRPS28	P21771	286 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	SCO1	P23833	295 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	RPL16A	P26784	199 aa	Known RBP	5.13	□□□□□ -1.59
TFB4	YPR056W	AVT5	P38176	459 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
TFB4	YPR056W	FMP23	P38231	175 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	SPL2	P38839	148 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	MTC6	P38849	526 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	RTS2	P40962	232 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	IDP3	P53982	420 aa	Known RBP	5.13	□□□□□ -1.59
TFB4	YPR056W	HSK3	P69852	69 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	YDR476C	Q03362	224 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	YMR010W	Q03687	405 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	YML018C	Q03730	393 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	YDR249C	Q03787	373 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	RRP40	Q08285	240 aa	Known RBP	5.13	□□□□□ -1.59
TFB4	YPR056W	FRE8	Q12209	686 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	HRT3	Q12347	344 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	SLO1	Q3E784	85 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.13	□□□□□ -1.59
TFB4	YPR056W	YCR024C-B	Q3E7Z8	88 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	RIB3	Q99258	208 aa		5.13	□□□□□ -1.59
TFB4	YPR056W	GSP1	P32835	219 aa	Known RBP	5.12	□□□□□ -1.59
TFB4	YPR056W	GSP2	P32836	220 aa	Known RBP	5.12	□□□□□ -1.59
TFB4	YPR056W	MRP21	P38175	177 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	GWT1	P47026	490 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	RSC9	Q03124	581 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	RAV2	Q03956	351 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	DTD1	Q07648	150 aa	Known RBP	5.12	□□□□□ -1.59
TFB4	YPR056W	PFA4	Q12006	378 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	PST2	Q12335	198 aa	Known RBP	5.12	□□□□□ -1.59
TFB4	YPR056W	HMS1	Q12398	434 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	PCL9	Q12477	304 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	MHT1	Q12525	324 aa		5.12	□□□□□ -1.59
TFB4	YPR056W	CDC50	P25656	391 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	MRPL39	P36533	70 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YBR137W	P38276	179 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YBR285W	P38354	144 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	RCK1	P38622	512 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	LEU5	P38702	357 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	PET8	P38921	284 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	MAM33	P40513	266 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	AIM25	P47140	327 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	UBC12	P52491	188 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	PRM8	P53174	237 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YNL184C	P53876	108 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	MRX11	Q03079	207 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	PLP1	Q04004	230 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YMR317W	Q04893	1140 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YPL257W	Q08974	193 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	MDM32	Q12171	622 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YLR046C	Q12253	270 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	TRM10	Q12400	293 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	YLR111W	Q12528	110 aa		5.11	□□□□□ -1.59
TFB4	YPR056W	NMT1	P14743	455 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	SAM2	P19358	384 aa	Known RBP	5.1	□□□□□ -1.59
TFB4	YPR056W	SEC14	P24280	304 aa	Known RBP	5.1	□□□□□ -1.59
TFB4	YPR056W	AGA1	P32323	725 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	AEP1	P32493	518 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	YIL067C	P40514	678 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	YJR015W	P47090	510 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	COQ5	P49017	307 aa		5.1	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms