RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C CLB6P32943 380 aa2.31□□□□□ -2.04
CCL1YPR025C MSN4P33749 630 aa2.31□□□□□ -2.04
CCL1YPR025C PRS4P38063 326 aaPredicted RBP2.31□□□□□ -2.04
CCL1YPR025C SSH1P38353 490 aaKnown RBP2.31□□□□□ -2.04
CCL1YPR025C SNZ3P43545 298 aa2.31□□□□□ -2.04
CCL1YPR025C ASI3P53983 676 aa2.31□□□□□ -2.04
CCL1YPR025C SRL4Q03085 281 aa2.31□□□□□ -2.04
CCL1YPR025C RUD3Q12234 484 aaKnown RBP2.31□□□□□ -2.04
CCL1YPR025C YOR029WQ12243 111 aa2.31□□□□□ -2.04
CCL1YPR025C EHD3P28817 500 aa2.3□□□□□ -2.04
CCL1YPR025C DRE2P36152 348 aa2.3□□□□□ -2.04
CCL1YPR025C MRX3P38172 270 aa2.3□□□□□ -2.04
CCL1YPR025C GLG2P47011 380 aa2.3□□□□□ -2.04
CCL1YPR025C YGL034CP53186 121 aa2.3□□□□□ -2.04
CCL1YPR025C SLM2P53955 656 aa2.3□□□□□ -2.04
CCL1YPR025C ATG17Q06410 417 aa2.3□□□□□ -2.04
CCL1YPR025C YPR147CQ06522 304 aaKnown RBP2.3□□□□□ -2.04
CCL1YPR025C ATG31Q12421 196 aa2.3□□□□□ -2.04
CCL1YPR025C FKS1P38631 1876 aaKnown RBP2.29□□□□□ -2.04
CCL1YPR025C ARG80P07249 177 aa2.29□□□□□ -2.04
CCL1YPR025C HOM6P31116 359 aaKnown RBP2.29□□□□□ -2.04
CCL1YPR025C YGP1P38616 354 aaKnown RBP2.29□□□□□ -2.04
CCL1YPR025C RTR1P40084 226 aaPredicted RBP2.29□□□□□ -2.04
CCL1YPR025C COG3P40094 801 aa2.29□□□□□ -2.04
CCL1YPR025C YJL016WP47072 561 aa2.29□□□□□ -2.04
CCL1YPR025C CAB4P53332 305 aa2.29□□□□□ -2.04
CCL1YPR025C CTF19Q02732 369 aa2.29□□□□□ -2.04
CCL1YPR025C YLR179CQ06252 201 aaKnown RBP2.29□□□□□ -2.04
CCL1YPR025C COQ10Q08058 207 aa2.29□□□□□ -2.04
CCL1YPR025C RNA15P25299 296 aaPredicted RBP2.28□□□□□ -2.04
CCL1YPR025C SGE1P33335 543 aa2.28□□□□□ -2.04
CCL1YPR025C BMH2P34730 273 aaKnown RBP2.28□□□□□ -2.04
CCL1YPR025C BFR1P38934 470 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04 RIP-Chip
CCL1YPR025C FMC1P40491 155 aa2.28□□□□□ -2.04
CCL1YPR025C SNZ2P53824 298 aa2.28□□□□□ -2.04
CCL1YPR025C YPR098CQ06089 161 aa2.28□□□□□ -2.04
CCL1YPR025C RRS1Q08746 203 aaKnown RBP2.28□□□□□ -2.04
CCL1YPR025C SWI1P09547 1314 aa2.27□□□□□ -2.05
CCL1YPR025C YKR104WP0CE69 306 aa2.27□□□□□ -2.05
CCL1YPR025C MATALPHA1P0CY06 175 aa2.27□□□□□ -2.05
CCL1YPR025C HMLALPHA1P0CY07 175 aa2.27□□□□□ -2.05
CCL1YPR025C YCR016WP25617 290 aaKnown RBP2.27□□□□□ -2.05
CCL1YPR025C NTG1P31378 399 aa2.27□□□□□ -2.05
CCL1YPR025C RCN1P36054 211 aa2.27□□□□□ -2.05
CCL1YPR025C YER085CP40058 173 aa2.27□□□□□ -2.05
CCL1YPR025C MNN5P46982 586 aa2.27□□□□□ -2.05
CCL1YPR025C USE1P53146 245 aa2.27□□□□□ -2.05
CCL1YPR025C CWC21Q03375 135 aaKnown RBP2.27□□□□□ -2.05
CCL1YPR025C GOT1Q03554 138 aa2.27□□□□□ -2.05
CCL1YPR025C PEX12Q04370 399 aa2.27□□□□□ -2.05
CCL1YPR025C YDR124WQ04608 324 aa2.27□□□□□ -2.05
CCL1YPR025C MSH5Q12175 901 aa2.27□□□□□ -2.05
CCL1YPR025C EMP46Q12396 444 aa2.27□□□□□ -2.05
CCL1YPR025C CHD1P32657 1468 aa2.26□□□□□ -2.05
CCL1YPR025C MRPL39P36533 70 aa2.26□□□□□ -2.05
CCL1YPR025C YBR096WP38256 230 aa2.26□□□□□ -2.05
CCL1YPR025C GOS1P38736 223 aa2.26□□□□□ -2.05
CCL1YPR025C TIF34P40217 347 aaKnown RBP2.26□□□□□ -2.05
CCL1YPR025C MRH4P53166 561 aa2.26□□□□□ -2.05
CCL1YPR025C COS6P53344 381 aa2.26□□□□□ -2.05
CCL1YPR025C PAM18Q07914 168 aa2.26□□□□□ -2.05
CCL1YPR025C YCT1Q12235 531 aa2.26□□□□□ -2.05
CCL1YPR025C GIS3Q12418 502 aa2.26□□□□□ -2.05
CCL1YPR025C SAS5Q99314 248 aa2.26□□□□□ -2.05
CCL1YPR025C SGA1P08019 549 aa2.25□□□□□ -2.05
CCL1YPR025C TCP1P12612 559 aaKnown RBP2.25□□□□□ -2.05
CCL1YPR025C SEC22P22214 214 aa2.25□□□□□ -2.05
CCL1YPR025C RPS5P26783 225 aaKnown RBP2.25□□□□□ -2.05
CCL1YPR025C YKT6P36015 200 aaKnown RBP2.25□□□□□ -2.05
CCL1YPR025C LDB7P38210 180 aa2.25□□□□□ -2.05
CCL1YPR025C FZO1P38297 855 aa2.25□□□□□ -2.05
CCL1YPR025C YHL026CP38740 315 aa2.25□□□□□ -2.05
CCL1YPR025C YER189WP40104 122 aa2.25□□□□□ -2.05
CCL1YPR025C MSS2P40990 351 aa2.25□□□□□ -2.05
CCL1YPR025C GCN20P43535 752 aaKnown RBP2.25□□□□□ -2.05
CCL1YPR025C OTU1P43558 301 aa2.25□□□□□ -2.05
CCL1YPR025C OST2P46964 130 aa2.25□□□□□ -2.05
CCL1YPR025C RSM10Q03201 203 aa2.25□□□□□ -2.05
CCL1YPR025C SPG4Q04438 115 aa2.25□□□□□ -2.05
CCL1YPR025C BBP1Q12365 385 aa2.25□□□□□ -2.05
CCL1YPR025C SNU23Q12368 194 aaPredicted RBP2.25□□□□□ -2.05
CCL1YPR025C RHO1P06780 209 aaKnown RBP2.24□□□□□ -2.05
CCL1YPR025C DOA4P32571 926 aa2.24□□□□□ -2.05
CCL1YPR025C TCD1P38756 429 aa2.24□□□□□ -2.05
CCL1YPR025C YHB1P39676 399 aaKnown RBP2.24□□□□□ -2.05
CCL1YPR025C THO1P40040 218 aaKnown RBP2.24□□□□□ -2.05
CCL1YPR025C MRPL49P40858 161 aaPredicted RBP2.24□□□□□ -2.05
CCL1YPR025C JHD2P47156 728 aaPredicted RBP2.24□□□□□ -2.05
CCL1YPR025C NOP13P53883 403 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CCL1YPR025C CGI121Q03705 181 aaKnown RBP2.24□□□□□ -2.05
CCL1YPR025C YLR283WQ05867 314 aa2.24□□□□□ -2.05
CCL1YPR025C RRP40Q08285 240 aaKnown RBP2.24□□□□□ -2.05
CCL1YPR025C SYC1Q08553 188 aaPredicted RBP2.24□□□□□ -2.05
CCL1YPR025C ADF1Q2V2Q1 113 aa2.24□□□□□ -2.05
CCL1YPR025C RPB4P20433 221 aaPredicted RBP2.23□□□□□ -2.05
CCL1YPR025C RPO26P20435 155 aa2.23□□□□□ -2.05
CCL1YPR025C MSA2P36157 363 aa2.23□□□□□ -2.05
CCL1YPR025C COS8P38723 381 aa2.23□□□□□ -2.05
CCL1YPR025C MRPL50P53724 139 aa2.23□□□□□ -2.05
CCL1YPR025C RHO3Q00245 231 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms