RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDE1	YPL110C	MRP20	P32387	263 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	DCG1	P32460	244 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	UTR2	P32623	467 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	APL3	P38065	1025 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	BUL1	P48524	976 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	YIP4	P53093	235 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	RTT102	P53330	157 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	ERP1	Q05359	219 aa	Known RBP	4.07	□□□□□ -1.76
GDE1	YPL110C	DIC1	Q06143	298 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	ORT1	Q12375	292 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	YLR462W	O13556	202 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	SUC2	P00724	532 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	ERS1	P17261	260 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	SNC2	P33328	115 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	VRP1	P37370	817 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	YNL194C	P40169	301 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	IBD2	P53892	351 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	YLR460C	P54007	376 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	LRS4	Q04087	347 aa	Known RBP	4.07	□□□□□ -1.76
GDE1	YPL110C	TRM12	Q04235	462 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	YLL058W	Q12198	575 aa		4.07	□□□□□ -1.76
GDE1	YPL110C	USB1	Q12208	290 aa	Known RBP	4.07	□□□□□ -1.76
GDE1	YPL110C	FLO11	P08640	1367 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	SAL1	D6W196	494 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	THP2	O13539	261 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	SRP68	P38687	599 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	YER076C	P40049	302 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	IRC8	P47046	822 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	ROG1	P53118	685 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	RSM10	Q03201	203 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	PAU23	Q07987	124 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	WSC3	Q12215	556 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	PAU17	Q12370	124 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	FRM2	P37261	193 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	TRM7	P38238	310 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	MDM31	P38880	579 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	OXA1	P39952	402 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	SHO1	P40073	367 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	STE24	P47154	453 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	AAH1	P53909	347 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	ACK1	Q07622	623 aa	Predicted RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	ACM1	Q08981	209 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	AIM45	Q12480	344 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	HTA1	P04911	132 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	HTA2	P04912	132 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	SLM5	P25345	492 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	YCR061W	P25639	631 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	UBC8	P28263	218 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	ACB1	P31787	87 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	SCW11	P53189	542 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	LSM7	P53905	115 aa	Known RBP	4.06	□□□□□ -1.76
GDE1	YPL110C	SCW10	Q04951	389 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	RKM5	Q12367	367 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	YIL134C-A	Q45U18	67 aa		4.06	□□□□□ -1.76
GDE1	YPL110C	BCS1	P32839	456 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
GDE1	YPL110C	YBR096W	P38256	230 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YEL075C	P39972	122 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	GET2	P40056	285 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YJR015W	P47090	510 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	RMD9	P53140	646 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	YGR168C	P53293	376 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	Q0182	Q9ZZW1	134 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	VAR1	P02381	398 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	PEP4	P07267	405 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	BGL2	P15703	313 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	ELO2	P25358	347 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	TRR1	P29509	319 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	YSC84	P32793	468 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	OMA1	P36163	345 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YIL165C	P40446	119 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	PAU15	P40585	124 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YGR015C	P53208	328 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YNR071C	P53757	342 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	RHO5	P53879	331 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	YNL092W	P53934	400 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	GIP3	Q03016	1276 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	NTH1	P32356	751 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	FMT1	P32785	401 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	TSL1	P38427	1098 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	FSH1	P38777	243 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	YHR177W	P38867	453 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	MCM22	P47167	239 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	TIM8	P57744	87 aa		4.05	□□□□□ -1.76
GDE1	YPL110C	YVH1	Q02256	364 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	PST2	Q12335	198 aa	Known RBP	4.05	□□□□□ -1.76
GDE1	YPL110C	COX3	P00420	269 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	SCO1	P23833	295 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	UME6	P39001	836 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	SDP1	P40479	209 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	FAR3	P46671	204 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	GCV1	P48015	400 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	SUR7	P54003	302 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	PLB2	Q03674	706 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	RPC11	Q04307	110 aa	Predicted RBP	4.04	□□□□□ -1.76
GDE1	YPL110C	ENT4	Q07872	247 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	DCI1	Q08558	271 aa		4.04	□□□□□ -1.76
GDE1	YPL110C	GPB1	Q08886	897 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms