RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C PAU21P0CE86 164 aa8.57□□□□□ -1.04
SPT20YOL148C PAU22P0CE87 164 aa8.57□□□□□ -1.04
SPT20YOL148C CBS1P14066 229 aa8.57□□□□□ -1.04
SPT20YOL148C PET18P25362 215 aa8.57□□□□□ -1.04
SPT20YOL148C PAU3P25610 124 aa8.57□□□□□ -1.04
SPT20YOL148C FMT1P32785 401 aa8.57□□□□□ -1.04
SPT20YOL148C SUI1P32911 108 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C GMH1P36125 273 aa8.57□□□□□ -1.04
SPT20YOL148C SAF1P38352 637 aa8.57□□□□□ -1.04
SPT20YOL148C SOH1P38633 127 aa8.57□□□□□ -1.04
SPT20YOL148C GIM4P40005 111 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C BNS1P50084 137 aa8.57□□□□□ -1.04
SPT20YOL148C MTM1P53320 366 aa8.57□□□□□ -1.04
SPT20YOL148C RSM23Q01163 450 aa8.57□□□□□ -1.04
SPT20YOL148C ERP1Q05359 219 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C PUS5Q06244 254 aa8.57□□□□□ -1.04
SPT20YOL148C MMP1Q12372 583 aa8.57□□□□□ -1.04
SPT20YOL148C RPS21BQ3E754 87 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C RIP1P08067 215 aa8.57□□□□□ -1.04
SPT20YOL148C STE4P18851 423 aa8.57□□□□□ -1.04
SPT20YOL148C NFS1P25374 497 aa8.57□□□□□ -1.04
SPT20YOL148C POP7P38291 140 aa8.57□□□□□ -1.04
SPT20YOL148C OST3P48439 350 aa8.57□□□□□ -1.04
SPT20YOL148C YAP1802P53309 568 aa8.57□□□□□ -1.04
SPT20YOL148C YMR178WQ03219 274 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C SNO4Q04902 237 aa8.57□□□□□ -1.04
SPT20YOL148C SYM1Q06563 197 aa8.57□□□□□ -1.04
SPT20YOL148C HSP33Q08914 237 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C HSP32Q08992 237 aa8.57□□□□□ -1.04
SPT20YOL148C YDL211CQ12121 372 aa8.57□□□□□ -1.04
SPT20YOL148C ORT1Q12375 292 aa8.57□□□□□ -1.04
SPT20YOL148C TMA7Q3E764 64 aaKnown RBP8.57□□□□□ -1.04
SPT20YOL148C STP22P25604 385 aa8.56□□□□□ -1.04
SPT20YOL148C FUB1P25659 250 aa8.56□□□□□ -1.04
SPT20YOL148C ECM34P38728 170 aa8.56□□□□□ -1.04
SPT20YOL148C TVP23P38962 199 aa8.56□□□□□ -1.04
SPT20YOL148C YEA6P39953 335 aa8.56□□□□□ -1.04
SPT20YOL148C RPL13BP40212 199 aaKnown RBP8.56□□□□□ -1.04
SPT20YOL148C CCC1P47818 322 aa8.56□□□□□ -1.04
SPT20YOL148C ELP4Q02884 456 aaKnown RBP8.56□□□□□ -1.04
SPT20YOL148C RUB1Q03919 77 aa8.56□□□□□ -1.04
SPT20YOL148C CAB5Q03941 241 aa8.56□□□□□ -1.04
SPT20YOL148C RPL13AQ12690 199 aaPredicted RBP8.56□□□□□ -1.04
SPT20YOL148C DET1Q99288 334 aaKnown RBP8.56□□□□□ -1.04
SPT20YOL148C ATG15P25641 520 aa8.55□□□□□ -1.04
SPT20YOL148C MGM101P32787 269 aaKnown RBP8.55□□□□□ -1.04
SPT20YOL148C IRC22P40006 225 aa8.55□□□□□ -1.04
SPT20YOL148C YER010CP40011 234 aa8.55□□□□□ -1.04
SPT20YOL148C IKS1P47042 667 aa8.55□□□□□ -1.04
SPT20YOL148C CDH1P53197 566 aa8.55□□□□□ -1.04
SPT20YOL148C AKR2Q12013 749 aa8.55□□□□□ -1.04
SPT20YOL148C POM33Q12164 279 aa8.55□□□□□ -1.04
SPT20YOL148C SPT23P35210 1082 aa8.54□□□□□ -1.04
SPT20YOL148C CHK1P38147 527 aa8.54□□□□□ -1.04
SPT20YOL148C RRN10P38204 145 aa8.54□□□□□ -1.04
SPT20YOL148C YNL195CP40168 261 aa8.54□□□□□ -1.04
SPT20YOL148C BXI1P48558 297 aa8.54□□□□□ -1.04
SPT20YOL148C YGL235WP53071 178 aa8.54□□□□□ -1.04
SPT20YOL148C YML018CQ03730 393 aa8.54□□□□□ -1.04
SPT20YOL148C BSP1Q06604 576 aa8.54□□□□□ -1.04
SPT20YOL148C GIC2Q06648 383 aa8.54□□□□□ -1.04
SPT20YOL148C RNQ1P25367 405 aa8.54□□□□□ -1.04
SPT20YOL148C FMP10P40098 244 aa8.54□□□□□ -1.04
SPT20YOL148C PHS1P40857 217 aa8.54□□□□□ -1.04
SPT20YOL148C YFR020WP43600 232 aa8.54□□□□□ -1.04
SPT20YOL148C ACS2P52910 683 aaKnown RBP8.54□□□□□ -1.04
SPT20YOL148C SKO1Q02100 647 aa8.54□□□□□ -1.04
SPT20YOL148C YOR015WQ12169 119 aa8.54□□□□□ -1.04
SPT20YOL148C RPL9AP05738 191 aaKnown RBP8.53□□□□□ -1.04
SPT20YOL148C MATALPHA1P0CY06 175 aa8.53□□□□□ -1.04
SPT20YOL148C HMLALPHA1P0CY07 175 aa8.53□□□□□ -1.04
SPT20YOL148C COQ3P27680 312 aa8.53□□□□□ -1.04
SPT20YOL148C PRO1P32264 428 aa8.53□□□□□ -1.04
SPT20YOL148C ALK2P32789 676 aaPredicted RBP8.53□□□□□ -1.04
SPT20YOL148C YBR292CP38357 123 aa8.53□□□□□ -1.04
SPT20YOL148C VBA2P38358 474 aaKnown RBP8.53□□□□□ -1.04
SPT20YOL148C WSS1P38838 269 aa8.53□□□□□ -1.04
SPT20YOL148C MET30P39014 640 aa8.53□□□□□ -1.04
SPT20YOL148C YEA4P40004 342 aa8.53□□□□□ -1.04
SPT20YOL148C RPL9BP51401 191 aaKnown RBP8.53□□□□□ -1.04
SPT20YOL148C EMC4P53073 190 aa8.53□□□□□ -1.04
SPT20YOL148C YVH1Q02256 364 aaKnown RBP8.53□□□□□ -1.04
SPT20YOL148C STD1Q02794 444 aa8.53□□□□□ -1.04
SPT20YOL148C YDR248CQ03786 193 aa8.53□□□□□ -1.04
SPT20YOL148C ASM4Q05166 528 aa8.53□□□□□ -1.04
SPT20YOL148C FRQ1Q06389 190 aa8.53□□□□□ -1.04
SPT20YOL148C VAM3Q12241 283 aa8.53□□□□□ -1.04
SPT20YOL148C DFR1P07807 211 aaKnown RBP RIP-Chip data8.52□□□□□ -1.04not detected
SPT20YOL148C RPB5P20434 215 aa8.52□□□□□ -1.04
SPT20YOL148C RFA2P26754 273 aaKnown RBP8.52□□□□□ -1.04
SPT20YOL148C MRPL16P38064 232 aa8.52□□□□□ -1.04
SPT20YOL148C RRP3P38712 501 aaKnown RBP8.52□□□□□ -1.04
SPT20YOL148C PAU5P43575 122 aa8.52□□□□□ -1.04
SPT20YOL148C YJR012CP47087 207 aa8.52□□□□□ -1.04
SPT20YOL148C ASK10P48361 1146 aa8.52□□□□□ -1.04
SPT20YOL148C TEX1P53851 422 aaKnown RBP8.52□□□□□ -1.04
SPT20YOL148C PIN3Q06449 215 aa8.52□□□□□ -1.04
SPT20YOL148C IZH2Q12442 317 aa8.52□□□□□ -1.04
SPT20YOL148C YMR262WP38430 313 aa8.52□□□□□ -1.05
SPT20YOL148C RRD1P40454 393 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms