RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	AIM6	Q07716	390 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	YLR030W	Q07967	263 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	SYC1	Q08553	188 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	SFG1	Q12507	346 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	YPR014C	Q6B0W2	109 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	ADH2	P00331	348 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	AI4	P03878	556 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	TRP4	P07285	380 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	SPS2	P08459	502 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	MRPL44	P19956	98 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	GAS1	P22146	559 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	YCP4	P25349	247 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	STP22	P25604	385 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	WSS1	P38838	269 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	UIP3	P39547	235 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	HIS6	P40545	261 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	AAD14	P42884	376 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	SLS1	P42900	643 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	MNN5	P46982	586 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	DPB11	P47027	764 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	SOL1	P50278	321 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	YGL159W	P53110	370 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	OGG1	P53397	376 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	ASI3	P53983	676 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	SAE3	P89114	91 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	TIM44	Q01852	431 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	MRP51	Q02950	344 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	EKI1	Q03764	534 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	MFB1	Q04922	465 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	YNG1	Q08465	219 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	ATX2	Q12067	313 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	PRP46	Q12417	451 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	CDC7	P06243	507 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	PDA1	P16387	420 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	SIP1	P32578	815 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	PAU2	P32612	120 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	EMP70	P32802	667 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	YNK1	P36010	153 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	YKL071W	P36086	256 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	MRPL15	P36523	253 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	NSG1	P38837	291 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	YHR180W	P38868	163 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	SEC72	P39742	193 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	LSM4	P40070	187 aa	Known RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	CAT5	P41735	233 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	PMT6	P42934	759 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	GTF1	P53260	183 aa	Predicted RBP	4.18	□□□□□ -1.74
SSB2	YNL209W	SEI1	Q06058	285 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	DIC1	Q06143	298 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	IZH3	Q07959	543 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	BSC6	Q08280	497 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	FMP27	Q06179	2628 aa		4.18	□□□□□ -1.74
SSB2	YNL209W	YOR304C-A	O14468	76 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	ARF1	P11076	181 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	PRE1	P22141	198 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	STE50	P25344	346 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	ERG24	P32462	438 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	HSP150	P32478	413 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SSB2	YNL209W	TCM62	P38228	572 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	COS8	P38723	381 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	AIM46	P38885	310 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	YHR210C	P38893	341 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	HXT9	P40885	567 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	MRX5	P47007	382 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	YGR017W	P53210	297 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	HXT11	P54862	567 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	BUD25	P85052	153 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	NUP116	Q02630	1113 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	YDR391C	Q04170	232 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	YLR179C	Q06252	201 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	ENB1	Q08299	606 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	TY1A-DR3	Q12441	440 aa		4.17	□□□□□ -1.74
SSB2	YNL209W	MRPL23	Q12487	163 aa	Predicted RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	POL2	P21951	2222 aa	Known RBP	4.17	□□□□□ -1.74
SSB2	YNL209W	CSF1	Q12150	2958 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	RPS13	P05756	151 aa	Known RBP	4.16	□□□□□ -1.74
SSB2	YNL209W	STE18	P18852	110 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	CNE1	P27825	502 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	ATS1	P31386	333 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	SPC29	P33419	253 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	TAT1	P38085	619 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	BDH1	P39714	382 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	BAP3	P41815	604 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	SPG5	P42933	373 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	AIM25	P47140	327 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	YGR066C	P53242	292 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	MPP6	P53725	186 aa	Predicted RBP	4.16	□□□□□ -1.74
SSB2	YNL209W	GIS1	Q03833	894 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	SIZ1	Q04195	904 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	TVP18	Q04767	167 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	YLR456W	Q06199	204 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	CTS2	Q06350	511 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	HRD1	Q08109	551 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	ISA2	Q12425	185 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	PET20	Q99373	253 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	TY1A-DR4	O74302	440 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	SGA1	P08019	549 aa		4.16	□□□□□ -1.74
SSB2	YNL209W	CYR1	P08678	2026 aa	Known RBP	4.16	□□□□□ -1.74
SSB2	YNL209W	TY1A-A	P0CX57	440 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms