RNA–Protein interactions for RNA: YNL112W

DBP2, Transcript of ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP2, Length 1,641 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP2	YNL112W	TYW3	P53177	273 aa		13.89	□□□□□ -0.19
DBP2	YNL112W	YDL218W	Q07629	317 aa		13.89	□□□□□ -0.19
DBP2	YNL112W	ERP4	Q12450	207 aa		13.89	□□□□□ -0.19
DBP2	YNL112W	DSF1	P0CX08	502 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	YNR073C	P0CX09	502 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	MCM1	P11746	286 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	VMA5	P31412	392 aa	Known RBP	13.88	□□□□□ -0.19
DBP2	YNL112W	AVT4	P50944	713 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	HHT1	P61830	136 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	ARG5,6	Q01217	863 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	VBA1	Q04301	562 aa		13.88	□□□□□ -0.19
DBP2	YNL112W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	13.87	□□□□□ -0.19	not detected
DBP2	YNL112W	AGA2	P32781	87 aa		13.87	□□□□□ -0.19
DBP2	YNL112W	VAM7	P32912	316 aa		13.87	□□□□□ -0.19
DBP2	YNL112W	GPP1	P41277	250 aa	Known RBP	13.87	□□□□□ -0.19
DBP2	YNL112W	YNR048W	P53740	393 aa		13.87	□□□□□ -0.19
DBP2	YNL112W	RCE1	Q03530	315 aa		13.87	□□□□□ -0.19
DBP2	YNL112W	HNT1	Q04344	158 aa	Known RBP	13.87	□□□□□ -0.19
DBP2	YNL112W	FSH3	Q99369	266 aa		13.87	□□□□□ -0.19
DBP2	YNL112W	RPL30	P14120	105 aa	Known RBP	13.86	□□□□□ -0.19
DBP2	YNL112W	YBR096W	P38256	230 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	SOL3	P38858	249 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	YND1	P40009	630 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	YER084W	P40057	128 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	IDP2	P41939	412 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	ACS2	P52910	683 aa	Known RBP	13.86	□□□□□ -0.19
DBP2	YNL112W	RSM27	P53305	110 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	TGS1	Q12052	315 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	YMR262W	P38430	313 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	GPG1	P53130	126 aa		13.86	□□□□□ -0.19
DBP2	YNL112W	HNM1	P19807	563 aa		13.85	□□□□□ -0.19
DBP2	YNL112W	DIT1	P21623	536 aa		13.85	□□□□□ -0.19
DBP2	YNL112W	MSS1	P32559	526 aa	Predicted RBP	13.85	□□□□□ -0.19
DBP2	YNL112W	APL3	P38065	1025 aa		13.85	□□□□□ -0.19
DBP2	YNL112W	SRP1	Q02821	542 aa	Known RBP	13.85	□□□□□ -0.19
DBP2	YNL112W	NCE102	Q12207	173 aa	RIP-Chip data	13.85	□□□□□ -0.19	not detected
DBP2	YNL112W	ARO3	P14843	370 aa	Known RBP	13.84	□□□□□ -0.19
DBP2	YNL112W	YOR385W	Q08909	290 aa		13.84	□□□□□ -0.19
DBP2	YNL112W	RPL6B	P05739	176 aa	Known RBP	13.83	□□□□□ -0.2
DBP2	YNL112W	HEM4	P06174	275 aa		13.83	□□□□□ -0.2
DBP2	YNL112W	YKL063C	P35725	167 aa		13.83	□□□□□ -0.2
DBP2	YNL112W	MRPL27	P36526	146 aa	Predicted RBP	13.83	□□□□□ -0.2
DBP2	YNL112W	NSA1	P53136	463 aa	Predicted RBP	13.83	□□□□□ -0.2
DBP2	YNL112W	COA4	Q05809	96 aa		13.83	□□□□□ -0.2
DBP2	YNL112W	HUT1	Q12520	339 aa		13.83	□□□□□ -0.2
DBP2	YNL112W	MOB2	P43563	287 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	OKP1	P53298	406 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	FIT3	Q08907	204 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	PRS5	Q12265	496 aa	Known RBP	13.82	□□□□□ -0.2
DBP2	YNL112W	PHO2	P07269	559 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	DEG1	P31115	442 aa	Known RBP	13.82	□□□□□ -0.2
DBP2	YNL112W	FLX1	P40464	311 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	XBP1	P40489	647 aa		13.82	□□□□□ -0.2
DBP2	YNL112W	CDC34	P14682	295 aa		13.81	□□□□□ -0.2
DBP2	YNL112W	RFA1	P22336	621 aa	Known RBP	13.81	□□□□□ -0.2
DBP2	YNL112W	FMT1	P32785	401 aa		13.81	□□□□□ -0.2
DBP2	YNL112W	GLY1	P37303	387 aa	Known RBP	13.81	□□□□□ -0.2
DBP2	YNL112W	FIG1	P38224	298 aa		13.81	□□□□□ -0.2
DBP2	YNL112W	QDR1	P40475	563 aa		13.81	□□□□□ -0.2
DBP2	YNL112W	STF2	P16965	84 aa		13.8	□□□□□ -0.2
DBP2	YNL112W	MCH2	P36032	473 aa		13.8	□□□□□ -0.2
DBP2	YNL112W	YER137C	P40083	148 aa	Known RBP	13.8	□□□□□ -0.2
DBP2	YNL112W	UFD1	P53044	361 aa		13.8	□□□□□ -0.2
DBP2	YNL112W	PLP1	Q04004	230 aa		13.8	□□□□□ -0.2
DBP2	YNL112W	MRX9	Q07349	420 aa	Known RBP	13.8	□□□□□ -0.2
DBP2	YNL112W	USB1	Q12208	290 aa	Known RBP	13.8	□□□□□ -0.2
DBP2	YNL112W	PAN3	P36102	679 aa	Predicted RBP	13.79	□□□□□ -0.2
DBP2	YNL112W	OST1	P41543	476 aa	Known RBP	13.79	□□□□□ -0.2
DBP2	YNL112W	RNH203	Q12338	110 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	CDC28	P00546	298 aa	Known RBP	13.79	□□□□□ -0.2
DBP2	YNL112W	REP2	P03872	296 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	MSI1	P13712	422 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	RRF1	P38771	230 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	GIM3	P53900	129 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	YPL077C	Q02831	240 aa		13.79	□□□□□ -0.2
DBP2	YNL112W	YLL053C	P0CD98	152 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	MAK32	P23060	363 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	MRPL36	P36531	177 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	MID1	P41821	548 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	GTF1	P53260	183 aa	Predicted RBP	13.78	□□□□□ -0.2
DBP2	YNL112W	YML018C	Q03730	393 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	PET20	Q99373	253 aa		13.78	□□□□□ -0.2
DBP2	YNL112W	AAC1	P04710	309 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	ARG80	P07249	177 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	RFA3	P26755	122 aa	Known RBP	13.77	□□□□□ -0.21
DBP2	YNL112W	MRP17	P28778	131 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	SIP18	P50263	79 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	MRPL50	P53724	139 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	NRG1	Q03125	231 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	YDR391C	Q04170	232 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	SPR28	Q04921	423 aa		13.77	□□□□□ -0.21
DBP2	YNL112W	RPL35A	P0CX84	120 aa	Known RBP	13.76	□□□□□ -0.21
DBP2	YNL112W	RPL35B	P0CX85	120 aa	Known RBP	13.76	□□□□□ -0.21
DBP2	YNL112W	TRM13	Q12383	476 aa		13.76	□□□□□ -0.21
DBP2	YNL112W	CKS1	P20486	150 aa	Known RBP	13.75	□□□□□ -0.21
DBP2	YNL112W	SAG1	P20840	650 aa		13.75	□□□□□ -0.21
DBP2	YNL112W	REC114	P32841	428 aa		13.75	□□□□□ -0.21
DBP2	YNL112W	SIT1	P39980	628 aa		13.75	□□□□□ -0.21
DBP2	YNL112W	HAS1	Q03532	505 aa	Known RBP	13.75	□□□□□ -0.21
DBP2	YNL112W	YDR248C	Q03786	193 aa		13.75	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 153.9 ms