RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A SIP3P38717 1229 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A ERG28P40030 148 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A YJR149WP47177 404 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A MAL12P53341 584 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A YNL046WP53956 172 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A MRPS17Q03246 237 aaPredicted RBP3.34□□□□□ -1.87
YNL054W-AYNL054W-A YOR186WQ08560 144 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A IES3Q12345 250 aa3.34□□□□□ -1.87
YNL054W-AYNL054W-A SNA3P14359 133 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A CDC10P25342 322 aaKnown RBP3.33□□□□□ -1.88
YNL054W-AYNL054W-A ECM13P38195 257 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A SPL2P38839 148 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A YJL028WP47062 111 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A MIC26P50087 233 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A EMI1Q04406 187 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A YMR114CQ04471 368 aaKnown RBP3.33□□□□□ -1.88
YNL054W-AYNL054W-A RRP40Q08285 240 aaKnown RBP3.33□□□□□ -1.88
YNL054W-AYNL054W-A SYC1Q08553 188 aaPredicted RBP3.33□□□□□ -1.88
YNL054W-AYNL054W-A YLR126CQ12288 251 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A NOT5Q12514 560 aaPredicted RBP3.33□□□□□ -1.88
YNL054W-AYNL054W-A YPL247CQ12523 523 aa3.33□□□□□ -1.88
YNL054W-AYNL054W-A SPT3P06844 337 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A BCY1P07278 416 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A YBR121C-AP0C5L4 52 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A ZWF1P11412 505 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A ERD2P18414 219 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A PPH21P23594 369 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A TOM40P23644 387 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A PRP18P33411 251 aaPredicted RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A CBT1P36038 271 aaPredicted RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A YHB1P39676 399 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A COX15P40086 486 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A PRE6P40303 254 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A RAD17P48581 401 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A TOS8P53147 276 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A BNA7Q04066 261 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A FCF1Q05498 189 aaPredicted RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A SMT3Q12306 101 aaKnown RBP3.32□□□□□ -1.88
YNL054W-AYNL054W-A YDL012CQ12489 107 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A PAN1P32521 1480 aa3.32□□□□□ -1.88
YNL054W-AYNL054W-A GDH2P33327 1092 aaKnown RBP3.31□□□□□ -1.88
YNL054W-AYNL054W-A PRY2P36110 329 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A MCM22P47167 239 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A CWC23P52868 283 aaPredicted RBP3.31□□□□□ -1.88
YNL054W-AYNL054W-A NIF3P53081 288 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A CGR1P53188 120 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A YDR124WQ04608 324 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A EMP46Q12396 444 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A YBL008W-AQ3E821 79 aa3.31□□□□□ -1.88
YNL054W-AYNL054W-A STE18P18852 110 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A PRX1P34227 261 aaKnown RBP3.3□□□□□ -1.88
YNL054W-AYNL054W-A MRPL39P36533 70 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A TEM1P38987 245 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A YNL194CP40169 301 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A TRM9P49957 279 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A MGA1P53050 456 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A RSM27P53305 110 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A CDC123Q05791 360 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A YOL019WQ08157 551 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A TPO4Q12256 659 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A ISD11Q6Q560 94 aa3.3□□□□□ -1.88
YNL054W-AYNL054W-A YDR157WA0A023PZE8 133 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A BMH1P29311 267 aaKnown RBP3.29□□□□□ -1.88
YNL054W-AYNL054W-A AGA2P32781 87 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A TAF14P35189 244 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A HAM1P47119 197 aaKnown RBP3.29□□□□□ -1.88
YNL054W-AYNL054W-A GOT1Q03554 138 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A IES4Q08561 116 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A YPR011CQ12251 326 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A DCN1Q12395 269 aa3.29□□□□□ -1.88
YNL054W-AYNL054W-A AST1P35183 429 aa3.28□□□□□ -1.88
YNL054W-AYNL054W-A MDM34P53083 459 aa3.28□□□□□ -1.88
YNL054W-AYNL054W-A NSA1P53136 463 aaPredicted RBP3.28□□□□□ -1.88
YNL054W-AYNL054W-A CUS2P53830 285 aaPredicted RBP3.28□□□□□ -1.88
YNL054W-AYNL054W-A ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
YNL054W-AYNL054W-A MSA1Q08471 629 aa3.28□□□□□ -1.88
YNL054W-AYNL054W-A YPL150WQ12152 901 aa3.28□□□□□ -1.88
YNL054W-AYNL054W-A YEL009C-AA0A023PZF2 135 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A YHR139C-AO13536 103 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A SFC1P33303 322 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A TKL2P33315 681 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A ECM14P38836 430 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A YER189WP40104 122 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A YIR035CP40579 254 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A MIG2P53035 382 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A ALG13P53178 202 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A SSQ1Q05931 657 aaPredicted RBP3.27□□□□□ -1.89
YNL054W-AYNL054W-A YPR063CQ12160 140 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A SWI1P09547 1314 aa3.27□□□□□ -1.89
YNL054W-AYNL054W-A HIS3P06633 220 aa3.26□□□□□ -1.89
YNL054W-AYNL054W-A RPS23AP0CX29 145 aaKnown RBP3.26□□□□□ -1.89
YNL054W-AYNL054W-A RPS23BP0CX30 145 aa3.26□□□□□ -1.89
YNL054W-AYNL054W-A SSO1P32867 290 aa3.26□□□□□ -1.89
YNL054W-AYNL054W-A SRY1P36007 326 aa3.26□□□□□ -1.89
YNL054W-AYNL054W-A YMR144WP40214 342 aaKnown RBP3.26□□□□□ -1.89
YNL054W-AYNL054W-A ECO1P43605 281 aa3.26□□□□□ -1.89
YNL054W-AYNL054W-A NUP157P40064 1391 aaKnown RBP3.26□□□□□ -1.89
YNL054W-AYNL054W-A NUP57P48837 541 aa3.25□□□□□ -1.89
YNL054W-AYNL054W-A YPR172WQ06608 200 aa3.25□□□□□ -1.89
YNL054W-AYNL054W-A GET4Q12125 312 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms