RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeastyeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC5YMR001C MRP1P10662 321 aaKnown RBP2.37□□□□□ -2.03
CDC5YMR001C KRE1P17260 313 aa2.37□□□□□ -2.03
CDC5YMR001C ERD2P18414 219 aa2.37□□□□□ -2.03
CDC5YMR001C YHI9P38765 294 aa2.37□□□□□ -2.03
CDC5YMR001C CTR2P38865 189 aa2.37□□□□□ -2.03
CDC5YMR001C OTU1P43558 301 aa2.37□□□□□ -2.03
CDC5YMR001C ASI3P53983 676 aa2.37□□□□□ -2.03
CDC5YMR001C KRE28Q04431 385 aa2.37□□□□□ -2.03
CDC5YMR001C YIR035CP40579 254 aa2.36□□□□□ -2.03
CDC5YMR001C MSS2P40990 351 aa2.36□□□□□ -2.03
CDC5YMR001C SPG4Q04438 115 aa2.36□□□□□ -2.03
CDC5YMR001C YJL144WP47009 104 aa2.36□□□□□ -2.03
CDC5YMR001C SWI1P09547 1314 aa2.36□□□□□ -2.03
CDC5YMR001C DPB2P24482 689 aaPredicted RBP2.35□□□□□ -2.03
CDC5YMR001C YCR016WP25617 290 aaKnown RBP2.35□□□□□ -2.03
CDC5YMR001C BFR1P38934 470 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
CDC5YMR001C GEP5Q12393 293 aa2.35□□□□□ -2.03
CDC5YMR001C MET2P08465 486 aa2.35□□□□□ -2.03
CDC5YMR001C SEC22P22214 214 aa2.35□□□□□ -2.03
CDC5YMR001C SRY1P36007 326 aa2.35□□□□□ -2.03
CDC5YMR001C NIF3P53081 288 aa2.35□□□□□ -2.03
CDC5YMR001C DCR2Q05924 578 aa2.35□□□□□ -2.03
CDC5YMR001C RAD10P06838 210 aa2.34□□□□□ -2.03
CDC5YMR001C DPM1P14020 267 aaKnown RBP2.34□□□□□ -2.03
CDC5YMR001C SNA3P14359 133 aa2.34□□□□□ -2.03
CDC5YMR001C SFC1P33303 322 aa2.34□□□□□ -2.03
CDC5YMR001C VPS21P36017 210 aaKnown RBP2.34□□□□□ -2.03
CDC5YMR001C TEM1P38987 245 aa2.34□□□□□ -2.03
CDC5YMR001C GCN20P43535 752 aaKnown RBP2.34□□□□□ -2.03
CDC5YMR001C YJR146WP47174 117 aa2.34□□□□□ -2.03
CDC5YMR001C SSU72P53538 206 aaPredicted RBP2.34□□□□□ -2.03
CDC5YMR001C YMR114CQ04471 368 aaKnown RBP2.34□□□□□ -2.03
CDC5YMR001C PEX10Q05568 337 aa2.34□□□□□ -2.03
CDC5YMR001C SYC1Q08553 188 aaPredicted RBP2.34□□□□□ -2.03
CDC5YMR001C ISD11Q6Q560 94 aa2.34□□□□□ -2.03
CDC5YMR001C MIG1P27705 504 aa2.33□□□□□ -2.04
CDC5YMR001C DRE2P36152 348 aa2.33□□□□□ -2.04
CDC5YMR001C RPA43P46669 326 aa2.33□□□□□ -2.04
CDC5YMR001C YGL088WP53151 121 aa2.33□□□□□ -2.04
CDC5YMR001C SLX9P53251 210 aaPredicted RBP2.33□□□□□ -2.04
CDC5YMR001C YDR209CQ03480 137 aa2.33□□□□□ -2.04
CDC5YMR001C ATG17Q06410 417 aa2.33□□□□□ -2.04
CDC5YMR001C MRX4Q12467 430 aa2.33□□□□□ -2.04
CDC5YMR001C JIP3O13555 125 aa2.32□□□□□ -2.04
CDC5YMR001C LIA1P47120 325 aaKnown RBP2.32□□□□□ -2.04
CDC5YMR001C YBL008W-AQ3E821 79 aa2.32□□□□□ -2.04
CDC5YMR001C COX5AP00424 153 aa2.32□□□□□ -2.04
CDC5YMR001C BMH1P29311 267 aaKnown RBP2.32□□□□□ -2.04
CDC5YMR001C RIB1P38066 345 aa2.32□□□□□ -2.04
CDC5YMR001C SYF2P53277 215 aaPredicted RBP2.32□□□□□ -2.04
CDC5YMR001C YPR147CQ06522 304 aaKnown RBP2.32□□□□□ -2.04
CDC5YMR001C RLP24Q07915 199 aaKnown RBP2.32□□□□□ -2.04
CDC5YMR001C YLR030WQ07967 263 aa2.32□□□□□ -2.04
CDC5YMR001C YLR126CQ12288 251 aa2.32□□□□□ -2.04
CDC5YMR001C THP2O13539 261 aaKnown RBP2.31□□□□□ -2.04
CDC5YMR001C MSA2P36157 363 aa2.31□□□□□ -2.04
CDC5YMR001C YHB1P39676 399 aaKnown RBP2.31□□□□□ -2.04
CDC5YMR001C GON7P46984 123 aa2.31□□□□□ -2.04
CDC5YMR001C TRM9P49957 279 aa2.31□□□□□ -2.04
CDC5YMR001C YGL159WP53110 370 aa2.31□□□□□ -2.04
CDC5YMR001C YLR179CQ06252 201 aaKnown RBP2.31□□□□□ -2.04
CDC5YMR001C CLP1Q08685 445 aaPredicted RBP2.31□□□□□ -2.04
CDC5YMR001C GIS3Q12418 502 aa2.31□□□□□ -2.04
CDC5YMR001C MAL32P38158 584 aa2.3□□□□□ -2.04
CDC5YMR001C RSM27P53305 110 aa2.3□□□□□ -2.04
CDC5YMR001C MAL12P53341 584 aa2.3□□□□□ -2.04
CDC5YMR001C VPS68Q12016 184 aa2.3□□□□□ -2.04
CDC5YMR001C RSA4P25382 515 aaKnown RBP2.3□□□□□ -2.04
CDC5YMR001C TAF14P35189 244 aa2.3□□□□□ -2.04
CDC5YMR001C MCM22P47167 239 aa2.3□□□□□ -2.04
CDC5YMR001C YPR172WQ06608 200 aa2.3□□□□□ -2.04
CDC5YMR001C RRP40Q08285 240 aaKnown RBP2.3□□□□□ -2.04
CDC5YMR001C RRS1Q08746 203 aaKnown RBP2.3□□□□□ -2.04
CDC5YMR001C YKL183C-AQ3E765 70 aa2.3□□□□□ -2.04
CDC5YMR001C NUP157P40064 1391 aaKnown RBP2.3□□□□□ -2.04
CDC5YMR001C SPT3P06844 337 aa2.29□□□□□ -2.04
CDC5YMR001C VMA6P32366 345 aaKnown RBP2.29□□□□□ -2.04
CDC5YMR001C BMH2P34730 273 aaKnown RBP2.29□□□□□ -2.04
CDC5YMR001C MIC12P38341 106 aa2.29□□□□□ -2.04
CDC5YMR001C ERG28P40030 148 aa2.29□□□□□ -2.04
CDC5YMR001C PBN1P25580 416 aa2.29□□□□□ -2.04
CDC5YMR001C MED6P38782 295 aa2.29□□□□□ -2.04
CDC5YMR001C YER188WP40103 239 aa2.29□□□□□ -2.04
CDC5YMR001C PEX17P40155 199 aa2.29□□□□□ -2.04
CDC5YMR001C MRPL50P53724 139 aa2.29□□□□□ -2.04
CDC5YMR001C YDR124WQ04608 324 aa2.29□□□□□ -2.04
CDC5YMR001C RPL26AP05743 127 aaKnown RBP2.28□□□□□ -2.04
CDC5YMR001C RNP1P32385 249 aa2.28□□□□□ -2.04
CDC5YMR001C FZO1P38297 855 aa2.28□□□□□ -2.04
CDC5YMR001C YHR127WP38833 243 aaKnown RBP2.28□□□□□ -2.04
CDC5YMR001C COG3P40094 801 aa2.28□□□□□ -2.04
CDC5YMR001C YER189WP40104 122 aa2.28□□□□□ -2.04
CDC5YMR001C ALG13P53178 202 aa2.28□□□□□ -2.04
CDC5YMR001C RPL26BP53221 127 aaKnown RBP2.28□□□□□ -2.04
CDC5YMR001C SEY1Q99287 776 aa2.28□□□□□ -2.04
CDC5YMR001C YLR462WO13556 202 aa2.27□□□□□ -2.05
CDC5YMR001C BCY1P07278 416 aaKnown RBP2.27□□□□□ -2.05
CDC5YMR001C YMR31P19955 123 aa2.27□□□□□ -2.05
CDC5YMR001C SCO1P23833 295 aa2.27□□□□□ -2.05
CDC5YMR001C CDC10P25342 322 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms