RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W ANR2P36090 516 aaPredicted RBP3.39□□□□□ -1.87
USA1YML029W YBR137WP38276 179 aa3.39□□□□□ -1.87
USA1YML029W PEX32P38292 413 aa3.39□□□□□ -1.87
USA1YML029W PTH1P38876 190 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W SER2P42941 309 aa3.39□□□□□ -1.87
USA1YML029W LYS5P50113 272 aa3.39□□□□□ -1.87
USA1YML029W MRH4P53166 561 aa3.39□□□□□ -1.87
USA1YML029W MTL1P53214 551 aa3.39□□□□□ -1.87
USA1YML029W API2Q04413 109 aa3.39□□□□□ -1.87
USA1YML029W PEX30Q06169 523 aa3.39□□□□□ -1.87
USA1YML029W TY1A-BLQ12266 440 aa3.39□□□□□ -1.87
USA1YML029W GCN1P33892 2672 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W STE18P18852 110 aa3.38□□□□□ -1.87
USA1YML029W MAK32P23060 363 aa3.38□□□□□ -1.87
USA1YML029W APL3P38065 1025 aa3.38□□□□□ -1.87
USA1YML029W SDS24P38314 527 aa3.38□□□□□ -1.87
USA1YML029W ARC40P38328 384 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W NOP16P40007 231 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W YIL169CP40442 995 aa3.38□□□□□ -1.87
USA1YML029W MOB2P43563 287 aa3.38□□□□□ -1.87
USA1YML029W ATG18P43601 500 aa3.38□□□□□ -1.87
USA1YML029W YMR265CQ03508 461 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W LRS4Q04087 347 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W CTS2Q06350 511 aa3.38□□□□□ -1.87
USA1YML029W MRPL35Q06678 367 aa3.38□□□□□ -1.87
USA1YML029W RRS1Q08746 203 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W TIR4Q12218 487 aaPredicted RBP3.38□□□□□ -1.87
USA1YML029W RTN2Q12443 393 aa3.38□□□□□ -1.87
USA1YML029W GCN4P03069 281 aa3.38□□□□□ -1.87
USA1YML029W HIS3P06633 220 aa3.38□□□□□ -1.87
USA1YML029W HXT2P23585 541 aa3.38□□□□□ -1.87
USA1YML029W ERG4P25340 473 aa3.38□□□□□ -1.87
USA1YML029W TCA17P32613 152 aa3.38□□□□□ -1.87
USA1YML029W REC114P32841 428 aa3.38□□□□□ -1.87
USA1YML029W RPC34P32910 317 aa3.38□□□□□ -1.87
USA1YML029W TMA19P35691 167 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W IPI1P38803 334 aaPredicted RBP3.38□□□□□ -1.87
USA1YML029W PUS4P48567 403 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W SIP18P50263 79 aa3.38□□□□□ -1.87
USA1YML029W TNA1P53322 534 aa3.38□□□□□ -1.87
USA1YML029W YDR102CQ03864 110 aa3.38□□□□□ -1.87
USA1YML029W ALG6Q12001 544 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W ISA2Q12425 185 aa3.38□□□□□ -1.87
USA1YML029W Q0142Q9ZZW4 58 aa3.38□□□□□ -1.87
USA1YML029W CDC39P25655 2108 aaKnown RBP3.38□□□□□ -1.87
USA1YML029W RPS18AP0CX55 146 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W RPS18BP0CX56 146 aaPredicted RBP3.37□□□□□ -1.87
USA1YML029W MEK1P24719 497 aaPredicted RBP3.37□□□□□ -1.87
USA1YML029W YCR101CP25607 182 aa3.37□□□□□ -1.87
USA1YML029W PTC6P25646 442 aa3.37□□□□□ -1.87
USA1YML029W DEG1P31115 442 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W HOM6P31116 359 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W SPT14P32363 452 aa3.37□□□□□ -1.87
USA1YML029W PPQ1P32945 549 aa3.37□□□□□ -1.87
USA1YML029W SFK1P35735 353 aa3.37□□□□□ -1.87
USA1YML029W FLO10P36170 1169 aa3.37□□□□□ -1.87
USA1YML029W FRM2P37261 193 aa3.37□□□□□ -1.87
USA1YML029W MIT1P40002 666 aa3.37□□□□□ -1.87
USA1YML029W CIN2P46670 268 aa3.37□□□□□ -1.87
USA1YML029W LYS20P48570 428 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W DOC1P53068 250 aa3.37□□□□□ -1.87
USA1YML029W SCW4P53334 386 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W ASI3P53983 676 aa3.37□□□□□ -1.87
USA1YML029W YPR098CQ06089 161 aa3.37□□□□□ -1.87
USA1YML029W RGC1Q06108 1083 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W ORM2Q06144 216 aa3.37□□□□□ -1.87
USA1YML029W NMA1Q06178 401 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W LYS21Q12122 440 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W YBR182C-AQ8TGU6 64 aa3.37□□□□□ -1.87
USA1YML029W RPS16AP0CX51 143 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W RPS16BP0CX52 143 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W APA2P22108 325 aa3.37□□□□□ -1.87
USA1YML029W ERG24P32462 438 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W ARO9P38840 513 aaPredicted RBP3.37□□□□□ -1.87
USA1YML029W BFR1P38934 470 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
USA1YML029W DLS1P40366 167 aa3.37□□□□□ -1.87
USA1YML029W SYS1P41544 203 aa3.37□□□□□ -1.87
USA1YML029W IRC18P47056 224 aa3.37□□□□□ -1.87
USA1YML029W ADO1P47143 340 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W ERV29P53337 310 aa3.37□□□□□ -1.87
USA1YML029W YNL046WP53956 172 aa3.37□□□□□ -1.87
USA1YML029W YKR005CQ02203 525 aa3.37□□□□□ -1.87
USA1YML029W DLT1Q04216 342 aa3.37□□□□□ -1.87
USA1YML029W PEX10Q05568 337 aa3.37□□□□□ -1.87
USA1YML029W ATG41Q12048 136 aa3.37□□□□□ -1.87
USA1YML029W PRS5Q12265 496 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W AIR2Q12476 344 aaKnown RBP3.37□□□□□ -1.87
USA1YML029W YBR056W-AI2HB52 66 aa3.36□□□□□ -1.87
USA1YML029W ADK1P07170 222 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W CHO1P08456 276 aa3.36□□□□□ -1.87
USA1YML029W RPS23AP0CX29 145 aaKnown RBP3.36□□□□□ -1.87
USA1YML029W RPS23BP0CX30 145 aa3.36□□□□□ -1.87
USA1YML029W CAP2P13517 287 aa3.36□□□□□ -1.87
USA1YML029W DIT1P21623 536 aa3.36□□□□□ -1.87
USA1YML029W AFG1P32317 509 aa3.36□□□□□ -1.87
USA1YML029W CLB6P32943 380 aa3.36□□□□□ -1.87
USA1YML029W YBR220CP38318 560 aa3.36□□□□□ -1.87
USA1YML029W MTC6P38849 526 aa3.36□□□□□ -1.87
USA1YML029W POP2P39008 433 aa3.36□□□□□ -1.87
USA1YML029W YER084WP40057 128 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms