RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W MRH4P53166 561 aa2.5□□□□□ -2.01
YLR400WYLR400W ALG13P53178 202 aa2.5□□□□□ -2.01
YLR400WYLR400W SWT21P53873 357 aaPredicted RBP2.5□□□□□ -2.01
YLR400WYLR400W YNL046WP53956 172 aa2.5□□□□□ -2.01
YLR400WYLR400W YPL039WQ03080 316 aa2.5□□□□□ -2.01
YLR400WYLR400W YPR172WQ06608 200 aa2.5□□□□□ -2.01
YLR400WYLR400W YOR186WQ08560 144 aa2.5□□□□□ -2.01
YLR400WYLR400W YLR126CQ12288 251 aa2.5□□□□□ -2.01
YLR400WYLR400W DCN1Q12395 269 aa2.5□□□□□ -2.01
YLR400WYLR400W YBL112CQ3E7Y4 105 aa2.5□□□□□ -2.01
YLR400WYLR400W FLO11P08640 1367 aa2.49□□□□□ -2.01
YLR400WYLR400W PSK1P31374 1356 aa2.49□□□□□ -2.01
YLR400WYLR400W MATALPHA2P0CY08 210 aa2.49□□□□□ -2.01
YLR400WYLR400W HMLALPHA2P0CY09 210 aa2.49□□□□□ -2.01
YLR400WYLR400W ERD2P18414 219 aa2.49□□□□□ -2.01
YLR400WYLR400W PRE7P23724 241 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W RFA3P26755 122 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W ADE1P27616 306 aa2.49□□□□□ -2.01
YLR400WYLR400W SGE1P33335 543 aa2.49□□□□□ -2.01
YLR400WYLR400W SRY1P36007 326 aa2.49□□□□□ -2.01
YLR400WYLR400W DRE2P36152 348 aa2.49□□□□□ -2.01
YLR400WYLR400W PHO89P38361 574 aa2.49□□□□□ -2.01
YLR400WYLR400W YHI9P38765 294 aa2.49□□□□□ -2.01
YLR400WYLR400W MCM22P47167 239 aa2.49□□□□□ -2.01
YLR400WYLR400W YGR067CP53243 804 aa2.49□□□□□ -2.01
YLR400WYLR400W SLX9P53251 210 aaPredicted RBP2.49□□□□□ -2.01
YLR400WYLR400W RHO3Q00245 231 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W YMR226CQ05016 267 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W YPR147CQ06522 304 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W ABP140Q08641 628 aaKnown RBP2.49□□□□□ -2.01
YLR400WYLR400W TPO4Q12256 659 aa2.49□□□□□ -2.01
YLR400WYLR400W AUS1Q08409 1394 aa2.49□□□□□ -2.01
YLR400WYLR400W CAB3P36076 571 aa2.48□□□□□ -2.01
YLR400WYLR400W YHB1P39676 399 aaKnown RBP2.48□□□□□ -2.01
YLR400WYLR400W SEO1P39709 593 aa2.48□□□□□ -2.01
YLR400WYLR400W BDH1P39714 382 aa2.48□□□□□ -2.01
YLR400WYLR400W YRB2P40517 327 aa2.48□□□□□ -2.01
YLR400WYLR400W ADO1P47143 340 aaKnown RBP2.48□□□□□ -2.01
YLR400WYLR400W NSA1P53136 463 aaPredicted RBP2.48□□□□□ -2.01
YLR400WYLR400W CAX4P53223 239 aa2.48□□□□□ -2.01
YLR400WYLR400W NOP19P53317 196 aaPredicted RBP2.48□□□□□ -2.01
YLR400WYLR400W SMD1Q02260 146 aaPredicted RBP2.48□□□□□ -2.01
YLR400WYLR400W TVP15Q03860 143 aa2.48□□□□□ -2.01
YLR400WYLR400W RRP40Q08285 240 aaKnown RBP2.48□□□□□ -2.01
YLR400WYLR400W YPL264CQ08980 353 aa2.48□□□□□ -2.01
YLR400WYLR400W TIM22Q12328 207 aa2.48□□□□□ -2.01
YLR400WYLR400W YHR139C-AO13536 103 aa2.47□□□□□ -2.01
YLR400WYLR400W QCR7P00128 127 aa2.47□□□□□ -2.01
YLR400WYLR400W CBF1P17106 351 aa2.47□□□□□ -2.01
YLR400WYLR400W SSO1P32867 290 aa2.47□□□□□ -2.01
YLR400WYLR400W IKI1P38874 309 aa2.47□□□□□ -2.01
YLR400WYLR400W YER034WP40022 185 aaKnown RBP2.47□□□□□ -2.01
YLR400WYLR400W OST3P48439 350 aa2.47□□□□□ -2.01
YLR400WYLR400W NUP57P48837 541 aa2.47□□□□□ -2.01
YLR400WYLR400W COQ5P49017 307 aa2.47□□□□□ -2.01
YLR400WYLR400W SYF2P53277 215 aaPredicted RBP2.47□□□□□ -2.01
YLR400WYLR400W EMI1Q04406 187 aa2.47□□□□□ -2.01
YLR400WYLR400W YDR222WQ04925 415 aa2.47□□□□□ -2.01
YLR400WYLR400W SYC1Q08553 188 aaPredicted RBP2.47□□□□□ -2.01
YLR400WYLR400W YDL211CQ12121 372 aa2.47□□□□□ -2.01
YLR400WYLR400W YRA1Q12159 226 aaKnown RBP2.47□□□□□ -2.01
YLR400WYLR400W YPS3Q12303 508 aa2.47□□□□□ -2.01
YLR400WYLR400W YDL012CQ12489 107 aa2.47□□□□□ -2.01
YLR400WYLR400W SIR4P11978 1358 aa2.47□□□□□ -2.01
YLR400WYLR400W HTB1P02293 131 aaKnown RBP2.46□□□□□ -2.02
YLR400WYLR400W HTB2P02294 131 aa2.46□□□□□ -2.02
YLR400WYLR400W MET2P08465 486 aa2.46□□□□□ -2.02
YLR400WYLR400W ECM13P38195 257 aa2.46□□□□□ -2.02
YLR400WYLR400W NNT1Q05874 261 aa2.46□□□□□ -2.02
YLR400WYLR400W MCH1Q07376 486 aa2.46□□□□□ -2.02
YLR400WYLR400W MSA1Q08471 629 aa2.46□□□□□ -2.02
YLR400WYLR400W JLP1Q12358 412 aa2.46□□□□□ -2.02
YLR400WYLR400W TUS1Q06412 1307 aa2.45□□□□□ -2.02
YLR400WYLR400W RPS19AP07280 144 aaKnown RBP2.45□□□□□ -2.02
YLR400WYLR400W RPS19BP07281 144 aaPredicted RBP2.45□□□□□ -2.02
YLR400WYLR400W URA6P15700 204 aa2.45□□□□□ -2.02
YLR400WYLR400W CPT1P17898 393 aa2.45□□□□□ -2.02
YLR400WYLR400W CKA2P19454 339 aa2.45□□□□□ -2.02
YLR400WYLR400W PPH21P23594 369 aa2.45□□□□□ -2.02
YLR400WYLR400W RAD51P25454 400 aa2.45□□□□□ -2.02
YLR400WYLR400W MRPL39P36533 70 aa2.45□□□□□ -2.02
YLR400WYLR400W TRM7P38238 310 aaKnown RBP2.45□□□□□ -2.02
YLR400WYLR400W SUR2P38992 349 aa2.45□□□□□ -2.02
YLR400WYLR400W RPE1P46969 238 aa2.45□□□□□ -2.02
YLR400WYLR400W YJL028WP47062 111 aa2.45□□□□□ -2.02
YLR400WYLR400W BRR6P53062 197 aa2.45□□□□□ -2.02
YLR400WYLR400W FYV6P53913 173 aa2.45□□□□□ -2.02
YLR400WYLR400W YDR124WQ04608 324 aa2.45□□□□□ -2.02
YLR400WYLR400W SMT3Q12306 101 aaKnown RBP2.45□□□□□ -2.02
YLR400WYLR400W PRR2Q12310 699 aa2.45□□□□□ -2.02
YLR400WYLR400W EMP46Q12396 444 aa2.45□□□□□ -2.02
YLR400WYLR400W NOT5Q12514 560 aaPredicted RBP2.45□□□□□ -2.02
YLR400WYLR400W YPL247CQ12523 523 aa2.45□□□□□ -2.02
YLR400WYLR400W RAD9P14737 1309 aa2.44□□□□□ -2.02
YLR400WYLR400W RPL28P02406 149 aaKnown RBP2.44□□□□□ -2.02
YLR400WYLR400W RPL27AP0C2H6 136 aaKnown RBP2.44□□□□□ -2.02
YLR400WYLR400W RPL27BP0C2H7 136 aaKnown RBP2.44□□□□□ -2.02
YLR400WYLR400W CUP2P15315 225 aa2.44□□□□□ -2.02
YLR400WYLR400W TOM40P23644 387 aaKnown RBP2.44□□□□□ -2.02
YLR400WYLR400W IDH1P28834 360 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
Retrieved 100 of 5,963 RNA–protein pairs in 54.9 ms