RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	PUS2	P53167	370 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	TGL2	P54857	326 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	CAB5	Q03941	241 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	YMR252C	Q04814	134 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	ROY1	Q04847	553 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	TGL5	Q12043	749 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	LAS17	Q12446	633 aa		6.65	□□□□□ -1.34
AFG2	YLR397C	RPL40A	P0CH08	128 aa	Known RBP	6.65	□□□□□ -1.35
AFG2	YLR397C	RPL40B	P0CH09	128 aa	Known RBP	6.65	□□□□□ -1.35
AFG2	YLR397C	PUT3	P25502	979 aa	Predicted RBP	6.65	□□□□□ -1.35
AFG2	YLR397C	UTR5	P32630	166 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	QDR3	P38227	689 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	TAE1	P38340	232 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	YHL044W	P38727	235 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	SPG5	P42933	373 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	MSB3	P48566	633 aa	Predicted RBP	6.65	□□□□□ -1.35
AFG2	YLR397C	SMM1	P53720	384 aa	Known RBP	6.65	□□□□□ -1.35
AFG2	YLR397C	ATG4	P53867	494 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	HEM25	Q07534	307 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	RRT7	Q07829	113 aa		6.65	□□□□□ -1.35
AFG2	YLR397C	YHR177W	P38867	453 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	PTH1	P38876	190 aa	Known RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	YGR066C	P53242	292 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	YNL134C	P53912	376 aa	Known RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	TPS1	Q00764	495 aa	Known RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	ADD37	Q03233	198 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	AAD4	Q07747	329 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	YCT1	Q12235	531 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	SKS1	Q12505	502 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	PHO2	P07269	559 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	SPT15	P13393	240 aa	Known RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	MEK1	P24719	497 aa	Predicted RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	POP5	P28005	173 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	SLC1	P33333	303 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	FIS1	P40515	155 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	YGR283C	P53336	341 aa	Predicted RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	TRM112	P53738	135 aa	Predicted RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	NOC4	Q06512	552 aa	Predicted RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	YLR050C	Q12155	161 aa	Known RBP	6.64	□□□□□ -1.35
AFG2	YLR397C	ERV2	Q12284	196 aa		6.64	□□□□□ -1.35
AFG2	YLR397C	MSW1	P04803	379 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	QCR2	P07257	368 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	YBR063C	P38083	404 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	MOH1	P38191	138 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	SHE1	P38200	338 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	NSA2	P40078	261 aa	Known RBP	6.63	□□□□□ -1.35
AFG2	YLR397C	COQ5	P49017	307 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	TYW3	P53177	273 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	APM1	Q00776	475 aa	Predicted RBP	6.63	□□□□□ -1.35
AFG2	YLR397C	COQ11	Q05892	277 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	PIN3	Q06449	215 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	FRE8	Q12209	686 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	PRS5	Q12265	496 aa	Known RBP	6.63	□□□□□ -1.35
AFG2	YLR397C	NDJ1	Q12366	352 aa		6.63	□□□□□ -1.35
AFG2	YLR397C	RAS1	P01119	309 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	PDA1	P16387	420 aa	Known RBP	6.62	□□□□□ -1.35
AFG2	YLR397C	SAG1	P20840	650 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	PAN3	P36102	679 aa	Predicted RBP	6.62	□□□□□ -1.35
AFG2	YLR397C	EAF5	P39995	279 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	OTU1	P43558	301 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	NMA1	Q06178	401 aa	Known RBP	6.62	□□□□□ -1.35
AFG2	YLR397C	TDA6	Q06466	467 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	SLM3	Q12093	417 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	YBL112C	Q3E7Y4	105 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	CDC43	P18898	376 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	GPI14	P47088	403 aa	Known RBP	6.62	□□□□□ -1.35
AFG2	YLR397C	MSY1	P48527	492 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	GIS1	Q03833	894 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	BNA5	Q05979	453 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	MCH1	Q07376	486 aa		6.62	□□□□□ -1.35
AFG2	YLR397C	PUT1	P09368	476 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	CBS1	P14066	229 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	ERG4	P25340	473 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	UPS2	P35200	230 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	DCW1	P36091	449 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	HEM14	P40012	539 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	CDC40	P40968	455 aa	Predicted RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	PFS2	P42841	465 aa	Known RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	TAM41	P53230	385 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	RSM10	Q03201	203 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	MRX8	Q05473	314 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	DPP1	Q05521	289 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	KEI1	Q06346	221 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	CUR1	Q06469	252 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	YLR413W	Q06689	675 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	YPL260W	Q08977	551 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	RRG1	Q12167	365 aa	Predicted RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	YPL229W	Q99395	206 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	MBF1	O14467	151 aa	Known RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	6.61	□□□□□ -1.35	not detected
AFG2	YLR397C	SOD2	P00447	233 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	ILV5	P06168	395 aa	Known RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	RIM1	P32445	135 aa	Known RBP	6.61	□□□□□ -1.35
AFG2	YLR397C	MCH2	P36032	473 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	YIL165C	P40446	119 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	SHR5	P41912	237 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	MEP2	P41948	499 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	YNL092W	P53934	400 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	ELC1	Q03071	99 aa		6.61	□□□□□ -1.35
AFG2	YLR397C	SCW10	Q04951	389 aa		6.61	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms