RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	EAF3	Q12432	401 aa		4.31	□□□□□ -1.72
SIS2	YKR072C	MRX4	Q12467	430 aa		4.31	□□□□□ -1.72
SIS2	YKR072C	PET54	P10834	293 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
SIS2	YKR072C	AEP1	P32493	518 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	MED8	P38304	223 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	MDM31	P38880	579 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	SCS7	Q03529	384 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	YDR248C	Q03786	193 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	YMR315W	Q04869	349 aa	Known RBP	4.3	□□□□□ -1.72
SIS2	YKR072C	YLR036C	Q07986	203 aa		4.3	□□□□□ -1.72
SIS2	YKR072C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.3	□□□□□ -1.72
SIS2	YKR072C	DBF2	P22204	572 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	TAH1	P25638	111 aa	Predicted RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	THI80	P35202	319 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	ECM33	P38248	429 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	PET8	P38921	284 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YMR144W	P40214	342 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	MRPL49	P40858	161 aa	Predicted RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	CPR7	P47103	393 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YJR054W	P47114	497 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	SUR7	P54003	302 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	TPS1	Q00764	495 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	TDA1	Q03533	586 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	SEI1	Q06058	285 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	FCY22	Q12119	530 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	CSR2	Q12734	1121 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	COX5A	P00424	153 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	MET2	P08465	486 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YKR104W	P0CE69	306 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	RPL4A	P10664	362 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	SEC1	P30619	724 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	UPS2	P35200	230 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	HOT13	P36078	116 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YBR137W	P38276	179 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	PEX22	P39718	180 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	MAM33	P40513	266 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YIL029C	P40538	142 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	LCB3	P47013	409 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	IKS1	P47042	667 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	BXI1	P48558	297 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	RPL4B	P49626	362 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	COG7	P53195	279 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	ARO80	Q04052	950 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	SPG4	Q04438	115 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	YOR283W	Q12040	230 aa	Known RBP	4.29	□□□□□ -1.72
SIS2	YKR072C	YDL199C	Q12407	687 aa		4.29	□□□□□ -1.72
SIS2	YKR072C	BNR1	P40450	1375 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	HAP1	P0CE41	1502 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	RPS18A	P0CX55	146 aa	Known RBP	4.28	□□□□□ -1.72
SIS2	YKR072C	RPS18B	P0CX56	146 aa	Predicted RBP	4.28	□□□□□ -1.72
SIS2	YKR072C	GCN3	P14741	305 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	CUP2	P15315	225 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	MRPL20	P22354	195 aa	Predicted RBP	4.28	□□□□□ -1.72
SIS2	YKR072C	YCR022C	P25620	114 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	TIP20	P33891	701 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	CLG1	P35190	452 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	YER076C	P40049	302 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	AZF1	P41696	914 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	MOB2	P43563	287 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	MDV1	P47025	714 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	NRM1	P53718	249 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	YDR415C	Q04033	374 aa	Predicted RBP	4.28	□□□□□ -1.72
SIS2	YKR072C	YPR127W	Q06494	345 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	SFM1	Q12314	213 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	RDI1	Q12434	202 aa		4.28	□□□□□ -1.72
SIS2	YKR072C	SEC22	P22214	214 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	FUN26	P31381	517 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	YKR041W	P36134	250 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	MRPL39	P36533	70 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	SCO2	P38072	301 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	MIX23	P38162	196 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	RIP-Chip
SIS2	YKR072C	RCK1	P38622	512 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	HEM14	P40012	539 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	PDS1	P40316	373 aa	Predicted RBP	4.27	□□□□□ -1.73
SIS2	YKR072C	OST1	P41543	476 aa	Known RBP	4.27	□□□□□ -1.73
SIS2	YKR072C	MHP1	P43638	1398 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	TOS8	P53147	276 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	SYF2	P53277	215 aa	Predicted RBP	4.27	□□□□□ -1.73
SIS2	YKR072C	COG5	P53951	403 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	IDP3	P53982	420 aa	Known RBP	4.27	□□□□□ -1.73
SIS2	YKR072C	UTP15	Q04305	513 aa	Known RBP	4.27	□□□□□ -1.73
SIS2	YKR072C	GAS2	Q06135	555 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	YLR031W	Q07978	186 aa		4.27	□□□□□ -1.73
SIS2	YKR072C	CDC28	P00546	298 aa	Known RBP	4.26	□□□□□ -1.73
SIS2	YKR072C	MIR1	P23641	311 aa	Known RBP	4.26	□□□□□ -1.73
SIS2	YKR072C	TRX3	P25372	127 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	SRY1	P36007	326 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	PAN6	P40459	309 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	PSA1	P41940	361 aa	Known RBP	4.26	□□□□□ -1.73
SIS2	YKR072C	COS4	P43542	379 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	MAK3	Q03503	176 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	FAR10	Q06001	478 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	YOL024W	Q08172	172 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	YPL245W	Q12179	454 aa	Known RBP	4.26	□□□□□ -1.73
SIS2	YKR072C	HMS1	Q12398	434 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	GLT1	Q12680	2145 aa	Known RBP	4.26	□□□□□ -1.73
SIS2	YKR072C	COS2	P0CX12	379 aa		4.26	□□□□□ -1.73
SIS2	YKR072C	COS3	P0CX13	379 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 123 ms