RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W SIP3P38717 1229 aa3.34□□□□□ -1.87
YJR028WYJR028W ERG28P40030 148 aa3.34□□□□□ -1.87
YJR028WYJR028W YJR149WP47177 404 aa3.34□□□□□ -1.87
YJR028WYJR028W MAL12P53341 584 aa3.34□□□□□ -1.87
YJR028WYJR028W YNL046WP53956 172 aa3.34□□□□□ -1.87
YJR028WYJR028W MRPS17Q03246 237 aaPredicted RBP3.34□□□□□ -1.87
YJR028WYJR028W YOR186WQ08560 144 aa3.34□□□□□ -1.87
YJR028WYJR028W IES3Q12345 250 aa3.34□□□□□ -1.87
YJR028WYJR028W SNA3P14359 133 aa3.33□□□□□ -1.88
YJR028WYJR028W CDC10P25342 322 aaKnown RBP3.33□□□□□ -1.88
YJR028WYJR028W ECM13P38195 257 aa3.33□□□□□ -1.88
YJR028WYJR028W SPL2P38839 148 aa3.33□□□□□ -1.88
YJR028WYJR028W YJL028WP47062 111 aa3.33□□□□□ -1.88
YJR028WYJR028W MIC26P50087 233 aa3.33□□□□□ -1.88
YJR028WYJR028W EMI1Q04406 187 aa3.33□□□□□ -1.88
YJR028WYJR028W YMR114CQ04471 368 aaKnown RBP3.33□□□□□ -1.88
YJR028WYJR028W RRP40Q08285 240 aaKnown RBP3.33□□□□□ -1.88
YJR028WYJR028W SYC1Q08553 188 aaPredicted RBP3.33□□□□□ -1.88
YJR028WYJR028W YLR126CQ12288 251 aa3.33□□□□□ -1.88
YJR028WYJR028W NOT5Q12514 560 aaPredicted RBP3.33□□□□□ -1.88
YJR028WYJR028W YPL247CQ12523 523 aa3.33□□□□□ -1.88
YJR028WYJR028W SPT3P06844 337 aa3.32□□□□□ -1.88
YJR028WYJR028W BCY1P07278 416 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W YBR121C-AP0C5L4 52 aa3.32□□□□□ -1.88
YJR028WYJR028W ZWF1P11412 505 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W ERD2P18414 219 aa3.32□□□□□ -1.88
YJR028WYJR028W PPH21P23594 369 aa3.32□□□□□ -1.88
YJR028WYJR028W TOM40P23644 387 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W PRP18P33411 251 aaPredicted RBP3.32□□□□□ -1.88
YJR028WYJR028W CBT1P36038 271 aaPredicted RBP3.32□□□□□ -1.88
YJR028WYJR028W YHB1P39676 399 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W COX15P40086 486 aa3.32□□□□□ -1.88
YJR028WYJR028W PRE6P40303 254 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W RAD17P48581 401 aa3.32□□□□□ -1.88
YJR028WYJR028W TOS8P53147 276 aa3.32□□□□□ -1.88
YJR028WYJR028W BNA7Q04066 261 aa3.32□□□□□ -1.88
YJR028WYJR028W FCF1Q05498 189 aaPredicted RBP3.32□□□□□ -1.88
YJR028WYJR028W SMT3Q12306 101 aaKnown RBP3.32□□□□□ -1.88
YJR028WYJR028W YDL012CQ12489 107 aa3.32□□□□□ -1.88
YJR028WYJR028W PAN1P32521 1480 aa3.32□□□□□ -1.88
YJR028WYJR028W GDH2P33327 1092 aaKnown RBP3.31□□□□□ -1.88
YJR028WYJR028W PRY2P36110 329 aa3.31□□□□□ -1.88
YJR028WYJR028W MCM22P47167 239 aa3.31□□□□□ -1.88
YJR028WYJR028W CWC23P52868 283 aaPredicted RBP3.31□□□□□ -1.88
YJR028WYJR028W NIF3P53081 288 aa3.31□□□□□ -1.88
YJR028WYJR028W CGR1P53188 120 aa3.31□□□□□ -1.88
YJR028WYJR028W YDR124WQ04608 324 aa3.31□□□□□ -1.88
YJR028WYJR028W EMP46Q12396 444 aa3.31□□□□□ -1.88
YJR028WYJR028W YBL008W-AQ3E821 79 aa3.31□□□□□ -1.88
YJR028WYJR028W STE18P18852 110 aa3.3□□□□□ -1.88
YJR028WYJR028W PRX1P34227 261 aaKnown RBP3.3□□□□□ -1.88
YJR028WYJR028W MRPL39P36533 70 aa3.3□□□□□ -1.88
YJR028WYJR028W TEM1P38987 245 aa3.3□□□□□ -1.88
YJR028WYJR028W YNL194CP40169 301 aa3.3□□□□□ -1.88
YJR028WYJR028W TRM9P49957 279 aa3.3□□□□□ -1.88
YJR028WYJR028W MGA1P53050 456 aa3.3□□□□□ -1.88
YJR028WYJR028W RSM27P53305 110 aa3.3□□□□□ -1.88
YJR028WYJR028W CDC123Q05791 360 aa3.3□□□□□ -1.88
YJR028WYJR028W YOL019WQ08157 551 aa3.3□□□□□ -1.88
YJR028WYJR028W TPO4Q12256 659 aa3.3□□□□□ -1.88
YJR028WYJR028W ISD11Q6Q560 94 aa3.3□□□□□ -1.88
YJR028WYJR028W YDR157WA0A023PZE8 133 aa3.29□□□□□ -1.88
YJR028WYJR028W BMH1P29311 267 aaKnown RBP3.29□□□□□ -1.88
YJR028WYJR028W AGA2P32781 87 aa3.29□□□□□ -1.88
YJR028WYJR028W TAF14P35189 244 aa3.29□□□□□ -1.88
YJR028WYJR028W HAM1P47119 197 aaKnown RBP3.29□□□□□ -1.88
YJR028WYJR028W GOT1Q03554 138 aa3.29□□□□□ -1.88
YJR028WYJR028W IES4Q08561 116 aa3.29□□□□□ -1.88
YJR028WYJR028W YPR011CQ12251 326 aa3.29□□□□□ -1.88
YJR028WYJR028W DCN1Q12395 269 aa3.29□□□□□ -1.88
YJR028WYJR028W AST1P35183 429 aa3.28□□□□□ -1.88
YJR028WYJR028W MDM34P53083 459 aa3.28□□□□□ -1.88
YJR028WYJR028W NSA1P53136 463 aaPredicted RBP3.28□□□□□ -1.88
YJR028WYJR028W CUS2P53830 285 aaPredicted RBP3.28□□□□□ -1.88
YJR028WYJR028W ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
YJR028WYJR028W MSA1Q08471 629 aa3.28□□□□□ -1.88
YJR028WYJR028W YPL150WQ12152 901 aa3.28□□□□□ -1.88
YJR028WYJR028W YEL009C-AA0A023PZF2 135 aa3.27□□□□□ -1.89
YJR028WYJR028W YHR139C-AO13536 103 aa3.27□□□□□ -1.89
YJR028WYJR028W SFC1P33303 322 aa3.27□□□□□ -1.89
YJR028WYJR028W TKL2P33315 681 aa3.27□□□□□ -1.89
YJR028WYJR028W ECM14P38836 430 aa3.27□□□□□ -1.89
YJR028WYJR028W YER189WP40104 122 aa3.27□□□□□ -1.89
YJR028WYJR028W YIR035CP40579 254 aa3.27□□□□□ -1.89
YJR028WYJR028W MIG2P53035 382 aa3.27□□□□□ -1.89
YJR028WYJR028W ALG13P53178 202 aa3.27□□□□□ -1.89
YJR028WYJR028W SSQ1Q05931 657 aaPredicted RBP3.27□□□□□ -1.89
YJR028WYJR028W YPR063CQ12160 140 aa3.27□□□□□ -1.89
YJR028WYJR028W SWI1P09547 1314 aa3.27□□□□□ -1.89
YJR028WYJR028W HIS3P06633 220 aa3.26□□□□□ -1.89
YJR028WYJR028W RPS23AP0CX29 145 aaKnown RBP3.26□□□□□ -1.89
YJR028WYJR028W RPS23BP0CX30 145 aa3.26□□□□□ -1.89
YJR028WYJR028W SSO1P32867 290 aa3.26□□□□□ -1.89
YJR028WYJR028W SRY1P36007 326 aa3.26□□□□□ -1.89
YJR028WYJR028W YMR144WP40214 342 aaKnown RBP3.26□□□□□ -1.89
YJR028WYJR028W ECO1P43605 281 aa3.26□□□□□ -1.89
YJR028WYJR028W NUP157P40064 1391 aaKnown RBP3.26□□□□□ -1.89
YJR028WYJR028W NUP57P48837 541 aa3.25□□□□□ -1.89
YJR028WYJR028W YPR172WQ06608 200 aa3.25□□□□□ -1.89
YJR028WYJR028W GET4Q12125 312 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms