RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MRX3P38172 270 aa1.56□□□□□ -2.16
PEP8YJL053W YGP1P38616 354 aaKnown RBP1.56□□□□□ -2.16
PEP8YJL053W MED6P38782 295 aa1.56□□□□□ -2.16
PEP8YJL053W TIF34P40217 347 aaKnown RBP1.56□□□□□ -2.16
PEP8YJL053W MNN5P46982 586 aa1.56□□□□□ -2.16
PEP8YJL053W USE1P53146 245 aa1.56□□□□□ -2.16
PEP8YJL053W MRPL50P53724 139 aa1.56□□□□□ -2.16
PEP8YJL053W EMI1Q04406 187 aa1.56□□□□□ -2.16
PEP8YJL053W SUE1Q06524 206 aa1.56□□□□□ -2.16
PEP8YJL053W SDO1Q07953 250 aaKnown RBP1.56□□□□□ -2.16
PEP8YJL053W MED4Q12343 284 aa1.56□□□□□ -2.16
PEP8YJL053W SNU23Q12368 194 aaPredicted RBP1.56□□□□□ -2.16
PEP8YJL053W GEP5Q12393 293 aa1.56□□□□□ -2.16
PEP8YJL053W NOT5Q12514 560 aaPredicted RBP1.56□□□□□ -2.16
PEP8YJL053W MDS3P53094 1487 aa1.56□□□□□ -2.16
PEP8YJL053W VPS13Q07878 3144 aa1.55□□□□□ -2.16
PEP8YJL053W YKR104WP0CE69 306 aa1.55□□□□□ -2.16
PEP8YJL053W SGE1P33335 543 aa1.55□□□□□ -2.16
PEP8YJL053W YHL026CP38740 315 aa1.55□□□□□ -2.16
PEP8YJL053W BIG1P38813 335 aa1.55□□□□□ -2.16
PEP8YJL053W YHB1P39676 399 aaKnown RBP1.55□□□□□ -2.16
PEP8YJL053W MRPL49P40858 161 aaPredicted RBP1.55□□□□□ -2.16
PEP8YJL053W BNA6P43619 295 aa1.55□□□□□ -2.16
PEP8YJL053W MDM34P53083 459 aa1.55□□□□□ -2.16
PEP8YJL053W MRH4P53166 561 aa1.55□□□□□ -2.16
PEP8YJL053W PEX12Q04370 399 aa1.55□□□□□ -2.16
PEP8YJL053W YLR173WQ06247 608 aa1.55□□□□□ -2.16
PEP8YJL053W RDS3Q06835 107 aaPredicted RBP1.55□□□□□ -2.16
PEP8YJL053W RRT8Q08219 342 aa1.55□□□□□ -2.16
PEP8YJL053W SYC1Q08553 188 aaPredicted RBP1.55□□□□□ -2.16
PEP8YJL053W CSM4Q08955 156 aa1.55□□□□□ -2.16
PEP8YJL053W YOR283WQ12040 230 aaKnown RBP1.55□□□□□ -2.16
PEP8YJL053W SIN3P22579 1536 aa1.55□□□□□ -2.16
PEP8YJL053W SEC22P22214 214 aa1.54□□□□□ -2.16
PEP8YJL053W SCO1P23833 295 aa1.54□□□□□ -2.16
PEP8YJL053W HOM6P31116 359 aaKnown RBP1.54□□□□□ -2.16
PEP8YJL053W JEN1P36035 616 aa1.54□□□□□ -2.16
PEP8YJL053W RHO3Q00245 231 aaKnown RBP1.54□□□□□ -2.16
PEP8YJL053W SPG4Q04438 115 aa1.54□□□□□ -2.16
PEP8YJL053W RRS1Q08746 203 aaKnown RBP1.54□□□□□ -2.16
PEP8YJL053W VPS68Q12016 184 aa1.54□□□□□ -2.16
PEP8YJL053W YPR011CQ12251 326 aa1.54□□□□□ -2.16
PEP8YJL053W SAS5Q99314 248 aa1.54□□□□□ -2.16
PEP8YJL053W COS8P38723 381 aa1.53□□□□□ -2.16
PEP8YJL053W SMB1P40018 196 aaKnown RBP1.53□□□□□ -2.16
PEP8YJL053W OST2P46964 130 aa1.53□□□□□ -2.16
PEP8YJL053W SLM2P53955 656 aa1.53□□□□□ -2.16
PEP8YJL053W RRN5Q02983 363 aa1.53□□□□□ -2.16
PEP8YJL053W YCT1Q12235 531 aa1.53□□□□□ -2.16
PEP8YJL053W BBP1Q12365 385 aa1.53□□□□□ -2.16
PEP8YJL053W EMP46Q12396 444 aa1.53□□□□□ -2.16
PEP8YJL053W MMS1Q06211 1407 aa1.52□□□□□ -2.17
PEP8YJL053W SGA1P08019 549 aa1.52□□□□□ -2.17
PEP8YJL053W RCN1P36054 211 aa1.52□□□□□ -2.17
PEP8YJL053W BFR1P38934 470 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
PEP8YJL053W THO1P40040 218 aaKnown RBP1.52□□□□□ -2.17
PEP8YJL053W YER189WP40104 122 aa1.52□□□□□ -2.17
PEP8YJL053W ARC15P40518 154 aaRIP-Chip data1.52□□□□□ -2.17not detected
PEP8YJL053W SNZ3P43545 298 aa1.52□□□□□ -2.17
PEP8YJL053W YJR146WP47174 117 aa1.52□□□□□ -2.17
PEP8YJL053W COS6P53344 381 aa1.52□□□□□ -2.17
PEP8YJL053W YNL134CP53912 376 aaKnown RBP1.52□□□□□ -2.17
PEP8YJL053W CTF19Q02732 369 aa1.52□□□□□ -2.17
PEP8YJL053W KRE28Q04431 385 aa1.52□□□□□ -2.17
PEP8YJL053W PAM18Q07914 168 aa1.52□□□□□ -2.17
PEP8YJL053W COQ10Q08058 207 aa1.52□□□□□ -2.17
PEP8YJL053W MSH5Q12175 901 aa1.52□□□□□ -2.17
PEP8YJL053W YOR029WQ12243 111 aa1.52□□□□□ -2.17
PEP8YJL053W EMC6Q12431 108 aa1.52□□□□□ -2.17
PEP8YJL053W TOR1P35169 2470 aa1.52□□□□□ -2.17
PEP8YJL053W HSL1P34244 1518 aa1.51□□□□□ -2.17
PEP8YJL053W YLR462WO13556 202 aa1.51□□□□□ -2.17
PEP8YJL053W ADH3P07246 375 aaKnown RBP1.51□□□□□ -2.17
PEP8YJL053W PUT1P09368 476 aa1.51□□□□□ -2.17
PEP8YJL053W CCA1P21269 546 aa1.51□□□□□ -2.17
PEP8YJL053W SCM4P32564 187 aa1.51□□□□□ -2.17
PEP8YJL053W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
PEP8YJL053W GOS1P38736 223 aa1.51□□□□□ -2.17
PEP8YJL053W YEL075CP39972 122 aa1.51□□□□□ -2.17
PEP8YJL053W FMC1P40491 155 aa1.51□□□□□ -2.17
PEP8YJL053W GLG2P47011 380 aa1.51□□□□□ -2.17
PEP8YJL053W RMR1P53060 241 aa1.51□□□□□ -2.17
PEP8YJL053W YMR279CQ03263 540 aa1.51□□□□□ -2.17
PEP8YJL053W CGI121Q03705 181 aaKnown RBP1.51□□□□□ -2.17
PEP8YJL053W FAR8Q05040 523 aa1.51□□□□□ -2.17
PEP8YJL053W YLR179CQ06252 201 aaKnown RBP1.51□□□□□ -2.17
PEP8YJL053W SWI1P09547 1314 aa1.5□□□□□ -2.17
PEP8YJL053W YHR127WP38833 243 aaKnown RBP1.5□□□□□ -2.17
PEP8YJL053W LIA1P47120 325 aaKnown RBP1.5□□□□□ -2.17
PEP8YJL053W YGR026WP53217 278 aa1.5□□□□□ -2.17
PEP8YJL053W CAB4P53332 305 aa1.5□□□□□ -2.17
PEP8YJL053W SNZ2P53824 298 aa1.5□□□□□ -2.17
PEP8YJL053W SRL4Q03085 281 aa1.5□□□□□ -2.17
PEP8YJL053W MHT1Q12525 324 aa1.5□□□□□ -2.17
PEP8YJL053W ERG24P32462 438 aaKnown RBP1.49□□□□□ -2.17
PEP8YJL053W SRB4P32569 687 aa1.49□□□□□ -2.17
PEP8YJL053W RPT5P33297 434 aaKnown RBP1.49□□□□□ -2.17
PEP8YJL053W YMR144WP40214 342 aaKnown RBP1.49□□□□□ -2.17
PEP8YJL053W SNX4P47057 423 aa1.49□□□□□ -2.17
PEP8YJL053W HAM1P47119 197 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms