RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YER137CP40083 148 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C PEX17P40155 199 aa1.71□□□□□ -2.14
RTT101YJL047C YMR144WP40214 342 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C AVT7P40501 490 aa1.71□□□□□ -2.14
RTT101YJL047C PSA1P41940 361 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C EGT2P42835 1041 aa1.71□□□□□ -2.14
RTT101YJL047C UBC12P52491 188 aa1.71□□□□□ -2.14
RTT101YJL047C YGL039WP53183 348 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C YGR018CP53211 109 aa1.71□□□□□ -2.14
RTT101YJL047C FMP41P53889 259 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C HSK3P69852 69 aa1.71□□□□□ -2.14
RTT101YJL047C YPR091CQ06833 770 aa1.71□□□□□ -2.14
RTT101YJL047C YLR036CQ07986 203 aa1.71□□□□□ -2.14
RTT101YJL047C YOL024WQ08172 172 aa1.71□□□□□ -2.14
RTT101YJL047C RRP40Q08285 240 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C RPN8Q08723 338 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C THP3Q12049 470 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C HRT3Q12347 344 aa1.71□□□□□ -2.14
RTT101YJL047C MHP1P43638 1398 aa1.71□□□□□ -2.14
RTT101YJL047C SEC4P07560 215 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C COS2P0CX12 379 aa1.71□□□□□ -2.14
RTT101YJL047C COS3P0CX13 379 aa1.71□□□□□ -2.14
RTT101YJL047C MRS3P10566 314 aa1.71□□□□□ -2.14
RTT101YJL047C RPL4AP10664 362 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C SEC22P22214 214 aa1.71□□□□□ -2.14
RTT101YJL047C AAT2P23542 418 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C OAR1P35731 278 aa1.71□□□□□ -2.14
RTT101YJL047C TRM7P38238 310 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C ECM14P38836 430 aa1.71□□□□□ -2.14
RTT101YJL047C XBP1P40489 647 aa1.71□□□□□ -2.14
RTT101YJL047C YIL067CP40514 678 aa1.71□□□□□ -2.14
RTT101YJL047C MOB2P43563 287 aa1.71□□□□□ -2.14
RTT101YJL047C AIM25P47140 327 aa1.71□□□□□ -2.14
RTT101YJL047C RPL4BP49626 362 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C YGL082WP53155 381 aa1.71□□□□□ -2.14
RTT101YJL047C CWC25P53854 179 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C YNL184CP53876 108 aa1.71□□□□□ -2.14
RTT101YJL047C AIM34Q03673 198 aa1.71□□□□□ -2.14
RTT101YJL047C ATP16Q12165 160 aa1.71□□□□□ -2.14
RTT101YJL047C YLR361C-AQ3E795 98 aa1.71□□□□□ -2.14
RTT101YJL047C TRP1P00912 224 aa1.7□□□□□ -2.14
RTT101YJL047C PIS1P06197 220 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C RPS18AP0CX55 146 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C RPS18BP0CX56 146 aaPredicted RBP1.7□□□□□ -2.14
RTT101YJL047C ERD2P18414 219 aa1.7□□□□□ -2.14
RTT101YJL047C MGT1P26188 188 aa1.7□□□□□ -2.14
RTT101YJL047C CAM1P29547 415 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C TCA17P32613 152 aa1.7□□□□□ -2.14
RTT101YJL047C SFK1P35735 353 aa1.7□□□□□ -2.14
RTT101YJL047C SOL2P37262 315 aa1.7□□□□□ -2.14
RTT101YJL047C CHS7P38843 316 aa1.7□□□□□ -2.14
RTT101YJL047C NVJ1P38881 321 aa1.7□□□□□ -2.14
RTT101YJL047C YJL213WP40896 331 aa1.7□□□□□ -2.14
RTT101YJL047C SNX4P47057 423 aa1.7□□□□□ -2.14
RTT101YJL047C PRM8P53174 237 aa1.7□□□□□ -2.14
RTT101YJL047C COS6P53344 381 aa1.7□□□□□ -2.14
RTT101YJL047C TIM44Q01852 431 aa1.7□□□□□ -2.14
RTT101YJL047C HNT1Q04344 158 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C YMR317WQ04893 1140 aa1.7□□□□□ -2.14
RTT101YJL047C YOL160WQ08321 113 aa1.7□□□□□ -2.14
RTT101YJL047C YOR292CQ08743 309 aa1.7□□□□□ -2.14
RTT101YJL047C FDH1Q08911 376 aa1.7□□□□□ -2.14
RTT101YJL047C SWI1P09547 1314 aa1.7□□□□□ -2.14
RTT101YJL047C RPO41P13433 1351 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C DRS2P39524 1355 aa1.7□□□□□ -2.14
RTT101YJL047C CDC43P18898 376 aa1.7□□□□□ -2.14
RTT101YJL047C IDP1P21954 428 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C AIM17P23180 465 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C SEC1P30619 724 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C APS1P35181 156 aa1.7□□□□□ -2.14
RTT101YJL047C FRM2P37261 193 aa1.7□□□□□ -2.14
RTT101YJL047C SEN34P39707 275 aa1.7□□□□□ -2.14
RTT101YJL047C PDS1P40316 373 aaPredicted RBP1.7□□□□□ -2.14
RTT101YJL047C YIL024CP40543 189 aa1.7□□□□□ -2.14
RTT101YJL047C CIN5P40917 295 aa1.7□□□□□ -2.14
RTT101YJL047C FLC3P53121 802 aa1.7□□□□□ -2.14
RTT101YJL047C HST4P53688 370 aa1.7□□□□□ -2.14
RTT101YJL047C TMA20P89886 181 aaPredicted RBP1.7□□□□□ -2.14
RTT101YJL047C YMR010WQ03687 405 aa1.7□□□□□ -2.14
RTT101YJL047C DTD1Q07648 150 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C YLR031WQ07978 186 aa1.7□□□□□ -2.14
RTT101YJL047C YOR376WQ08900 122 aa1.7□□□□□ -2.14
RTT101YJL047C ERV2Q12284 196 aa1.7□□□□□ -2.14
RTT101YJL047C TRM10Q12400 293 aa1.7□□□□□ -2.14
RTT101YJL047C PEX11Q12462 236 aa1.7□□□□□ -2.14
RTT101YJL047C EFG1Q3E705 233 aaKnown RBP1.7□□□□□ -2.14
RTT101YJL047C YHR214C-EQ8TGK0 99 aa1.7□□□□□ -2.14
RTT101YJL047C YIL177CP40434 1758 aa1.69□□□□□ -2.14
RTT101YJL047C YJL225CP40889 1758 aa1.69□□□□□ -2.14
RTT101YJL047C YMR316C-AI2HB70 103 aa1.69□□□□□ -2.14
RTT101YJL047C RPN13O13563 156 aa1.69□□□□□ -2.14
RTT101YJL047C YER190C-BP0CX94 160 aa1.69□□□□□ -2.14
RTT101YJL047C YEL077W-AP0CX95 160 aa1.69□□□□□ -2.14
RTT101YJL047C YGR296C-BP0CX96 160 aa1.69□□□□□ -2.14
RTT101YJL047C YPL283W-BP0CX97 160 aa1.69□□□□□ -2.14
RTT101YJL047C YPR204C-AP0CX98 160 aa1.69□□□□□ -2.14
RTT101YJL047C EPT1P22140 391 aa1.69□□□□□ -2.14
RTT101YJL047C TRS65P32893 560 aa1.69□□□□□ -2.14
RTT101YJL047C CSG2P35206 410 aa1.69□□□□□ -2.14
RTT101YJL047C PMU1P36069 295 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms