RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W OLE1P21147 510 aaKnown RBP5.14□□□□□ -1.59
PRE3YJL001W YME2P32843 850 aa5.14□□□□□ -1.59
PRE3YJL001W RPC34P32910 317 aa5.14□□□□□ -1.59
PRE3YJL001W YNK1P36010 153 aaKnown RBP5.14□□□□□ -1.59
PRE3YJL001W LOH1P47055 219 aa5.14□□□□□ -1.59
PRE3YJL001W TMA22P47089 198 aaPredicted RBP5.14□□□□□ -1.59
PRE3YJL001W YNL095CP53932 642 aa5.14□□□□□ -1.59
PRE3YJL001W YDC1Q02896 317 aa5.14□□□□□ -1.59
PRE3YJL001W MRPL51Q06090 140 aaPredicted RBP5.14□□□□□ -1.59
PRE3YJL001W RRP9Q06506 573 aaKnown RBP5.14□□□□□ -1.59
PRE3YJL001W SYC1Q08553 188 aaPredicted RBP5.14□□□□□ -1.59
PRE3YJL001W RAX2Q12465 1220 aa5.14□□□□□ -1.59
PRE3YJL001W YDL007C-AQ2V2Q0 85 aa5.14□□□□□ -1.59
PRE3YJL001W SCEIP03882 235 aa5.13□□□□□ -1.59
PRE3YJL001W RRP7P25368 297 aaPredicted RBP5.13□□□□□ -1.59
PRE3YJL001W KRR1P25586 316 aaPredicted RBP5.13□□□□□ -1.59
PRE3YJL001W SUR1P33300 382 aa5.13□□□□□ -1.59
PRE3YJL001W RBG1P39729 369 aa5.13□□□□□ -1.59
PRE3YJL001W PHM8P40025 321 aa5.13□□□□□ -1.59
PRE3YJL001W MAM33P40513 266 aa5.13□□□□□ -1.59
PRE3YJL001W SWP82P43554 623 aa5.13□□□□□ -1.59
PRE3YJL001W HMS2P47175 358 aa5.13□□□□□ -1.59
PRE3YJL001W DSL1P53847 754 aa5.13□□□□□ -1.59
PRE3YJL001W ABZ2Q03266 374 aa5.13□□□□□ -1.59
PRE3YJL001W AIM36Q03798 255 aa5.13□□□□□ -1.59
PRE3YJL001W BCP1Q06338 283 aa5.13□□□□□ -1.59
PRE3YJL001W USB1Q12208 290 aaKnown RBP5.13□□□□□ -1.59
PRE3YJL001W RRI1Q12468 440 aa5.13□□□□□ -1.59
PRE3YJL001W AQY1P0CD91 305 aa5.12□□□□□ -1.59
PRE3YJL001W STE18P18852 110 aa5.12□□□□□ -1.59
PRE3YJL001W SNF6P18888 332 aa5.12□□□□□ -1.59
PRE3YJL001W PRY2P36110 329 aa5.12□□□□□ -1.59
PRE3YJL001W YBR241CP38142 488 aa5.12□□□□□ -1.59
PRE3YJL001W GDT1P38301 280 aaPredicted RBP5.12□□□□□ -1.59
PRE3YJL001W PAC2P39937 518 aa5.12□□□□□ -1.59
PRE3YJL001W TAX4P47030 604 aa5.12□□□□□ -1.59
PRE3YJL001W RSM23Q01163 450 aa5.12□□□□□ -1.59
PRE3YJL001W PRP3Q03338 469 aaPredicted RBP5.12□□□□□ -1.59
PRE3YJL001W OSW1Q08692 278 aa5.12□□□□□ -1.59
PRE3YJL001W GCN4P03069 281 aa5.11□□□□□ -1.59
PRE3YJL001W IES6P32617 166 aa5.11□□□□□ -1.59
PRE3YJL001W YOX1P34161 385 aa5.11□□□□□ -1.59
PRE3YJL001W TIF3P34167 436 aaKnown RBP5.11□□□□□ -1.59
PRE3YJL001W MCH2P36032 473 aa5.11□□□□□ -1.59
PRE3YJL001W SRP102P36057 244 aaPredicted RBP5.11□□□□□ -1.59
PRE3YJL001W AGE2P40529 298 aa5.11□□□□□ -1.59
PRE3YJL001W ASI3P53983 676 aa5.11□□□□□ -1.59
PRE3YJL001W NNT1Q05874 261 aa5.11□□□□□ -1.59
PRE3YJL001W IRC25Q07951 179 aa5.11□□□□□ -1.59
PRE3YJL001W SRL1Q08673 210 aa5.11□□□□□ -1.59
PRE3YJL001W YGR035W-AQ45U48 73 aa5.11□□□□□ -1.59
PRE3YJL001W YER190C-BP0CX94 160 aa5.1□□□□□ -1.59
PRE3YJL001W YEL077W-AP0CX95 160 aa5.1□□□□□ -1.59
PRE3YJL001W YGR296C-BP0CX96 160 aa5.1□□□□□ -1.59
PRE3YJL001W YPL283W-BP0CX97 160 aa5.1□□□□□ -1.59
PRE3YJL001W YPR204C-AP0CX98 160 aa5.1□□□□□ -1.59
PRE3YJL001W YFL068WP0CX99 160 aa5.1□□□□□ -1.59
PRE3YJL001W YLL066W-AP0CY00 160 aa5.1□□□□□ -1.59
PRE3YJL001W YLL067W-AP0CY01 160 aa5.1□□□□□ -1.59
PRE3YJL001W PWP1P21304 576 aaKnown RBP5.1□□□□□ -1.59
PRE3YJL001W MEK1P24719 497 aaPredicted RBP5.1□□□□□ -1.59
PRE3YJL001W RPS20P38701 121 aaKnown RBP5.1□□□□□ -1.59
PRE3YJL001W CHL4P38907 458 aa5.1□□□□□ -1.59
PRE3YJL001W SPO73P40031 143 aa5.1□□□□□ -1.59
PRE3YJL001W SLM1P40485 686 aa5.1□□□□□ -1.59
PRE3YJL001W CTK2P46962 323 aa5.1□□□□□ -1.59
PRE3YJL001W YDL186WP48568 277 aa5.1□□□□□ -1.59
PRE3YJL001W NSA1P53136 463 aaPredicted RBP5.1□□□□□ -1.59
PRE3YJL001W PRM8P53174 237 aa5.1□□□□□ -1.59
PRE3YJL001W RNH201P53942 307 aa5.1□□□□□ -1.59
PRE3YJL001W DIG2Q03373 323 aaKnown RBP5.1□□□□□ -1.59
PRE3YJL001W SPC24Q04477 213 aa5.1□□□□□ -1.59
PRE3YJL001W ELP6Q04868 273 aa5.1□□□□□ -1.59
PRE3YJL001W SPC2Q04969 178 aa5.1□□□□□ -1.59
PRE3YJL001W YLR126CQ12288 251 aa5.1□□□□□ -1.59
PRE3YJL001W TDH3P00359 332 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
PRE3YJL001W MES1P00958 751 aaKnown RBP5.09□□□□□ -1.59
PRE3YJL001W YAK1P14680 807 aa5.09□□□□□ -1.59
PRE3YJL001W DEG1P31115 442 aaKnown RBP5.09□□□□□ -1.59
PRE3YJL001W ACH1P32316 526 aa5.09□□□□□ -1.59
PRE3YJL001W YKR015CP36111 568 aa5.09□□□□□ -1.59
PRE3YJL001W TCM62P38228 572 aaKnown RBP5.09□□□□□ -1.59
PRE3YJL001W FZO1P38297 855 aa5.09□□□□□ -1.59
PRE3YJL001W HHT1P61830 136 aa5.09□□□□□ -1.59
PRE3YJL001W ACL4Q03771 387 aa5.09□□□□□ -1.59
PRE3YJL001W GPI17Q04080 534 aa5.09□□□□□ -1.59
PRE3YJL001W UTP15Q04305 513 aaKnown RBP5.09□□□□□ -1.59
PRE3YJL001W YDR114CQ04597 100 aa5.09□□□□□ -1.59
PRE3YJL001W YPR098CQ06089 161 aa5.09□□□□□ -1.59
PRE3YJL001W YOR289WQ12012 251 aaPredicted RBP5.09□□□□□ -1.59
PRE3YJL001W YOR029WQ12243 111 aa5.09□□□□□ -1.59
PRE3YJL001W ADF1Q2V2Q1 113 aa5.09□□□□□ -1.59
PRE3YJL001W YOL159C-AQ3E769 90 aa5.09□□□□□ -1.59
PRE3YJL001W BUD5P25300 642 aaPredicted RBP5.08□□□□□ -1.6
PRE3YJL001W TFC1P32367 649 aa5.08□□□□□ -1.6
PRE3YJL001W PDB1P32473 366 aaKnown RBP5.08□□□□□ -1.6
PRE3YJL001W REC114P32841 428 aa5.08□□□□□ -1.6
PRE3YJL001W ARC40P38328 384 aaKnown RBP5.08□□□□□ -1.6
PRE3YJL001W RMD6P39975 231 aa5.08□□□□□ -1.6
PRE3YJL001W ATF1P40353 525 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms