RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C TPS1Q00764 495 aaKnown RBP2.85□□□□□ -1.95
MSM1YGR171C YPD1Q07688 167 aa2.85□□□□□ -1.95
MSM1YGR171C RFM1Q12192 310 aa2.85□□□□□ -1.95
MSM1YGR171C YLR126CQ12288 251 aa2.85□□□□□ -1.95
MSM1YGR171C BI3Q9ZZW7 517 aa2.85□□□□□ -1.95
MSM1YGR171C RPS24AP0CX31 135 aaKnown RBP2.84□□□□□ -1.96
MSM1YGR171C RPS24BP0CX32 135 aaKnown RBP2.84□□□□□ -1.96
MSM1YGR171C RPL4AP10664 362 aaKnown RBP2.84□□□□□ -1.96
MSM1YGR171C AEP1P32493 518 aa2.84□□□□□ -1.96
MSM1YGR171C MRPL3P36516 390 aa2.84□□□□□ -1.96
MSM1YGR171C YCR087C-AP37263 153 aa2.84□□□□□ -1.96
MSM1YGR171C SHE1P38200 338 aa2.84□□□□□ -1.96
MSM1YGR171C IGD1P43598 195 aa2.84□□□□□ -1.96
MSM1YGR171C MCM22P47167 239 aa2.84□□□□□ -1.96
MSM1YGR171C RPL4BP49626 362 aaKnown RBP2.84□□□□□ -1.96
MSM1YGR171C YIP3P53633 176 aa2.84□□□□□ -1.96
MSM1YGR171C YLR152CP54072 576 aa2.84□□□□□ -1.96
MSM1YGR171C CDC14Q00684 551 aa2.84□□□□□ -1.96
MSM1YGR171C ADD37Q03233 198 aa2.84□□□□□ -1.96
MSM1YGR171C YDR115WQ04598 105 aa2.84□□□□□ -1.96
MSM1YGR171C YPR147CQ06522 304 aaKnown RBP2.84□□□□□ -1.96
MSM1YGR171C FOL3Q12676 427 aaPredicted RBP2.84□□□□□ -1.96
MSM1YGR171C DRS2P39524 1355 aa2.84□□□□□ -1.96
MSM1YGR171C PPH21P23594 369 aa2.83□□□□□ -1.96
MSM1YGR171C EHD3P28817 500 aa2.83□□□□□ -1.96
MSM1YGR171C NTF2P33331 125 aaKnown RBP2.83□□□□□ -1.96
MSM1YGR171C UTP11P34247 250 aaPredicted RBP2.83□□□□□ -1.96
MSM1YGR171C RFT1P38206 574 aaPredicted RBP2.83□□□□□ -1.96
MSM1YGR171C MED8P38304 223 aa2.83□□□□□ -1.96
MSM1YGR171C CIN5P40917 295 aa2.83□□□□□ -1.96
MSM1YGR171C YJR056CP47115 236 aa2.83□□□□□ -1.96
MSM1YGR171C TRM9P49957 279 aa2.83□□□□□ -1.96
MSM1YGR171C ALG13P53178 202 aa2.83□□□□□ -1.96
MSM1YGR171C YOR376WQ08900 122 aa2.83□□□□□ -1.96
MSM1YGR171C YOR289WQ12012 251 aaPredicted RBP2.83□□□□□ -1.96
MSM1YGR171C YPL150WQ12152 901 aa2.83□□□□□ -1.96
MSM1YGR171C TPO4Q12256 659 aa2.83□□□□□ -1.96
MSM1YGR171C SIR4P11978 1358 aa2.83□□□□□ -1.96
MSM1YGR171C PUT1P09368 476 aa2.82□□□□□ -1.96
MSM1YGR171C URA6P15700 204 aa2.82□□□□□ -1.96
MSM1YGR171C BGL2P15703 313 aaKnown RBP2.82□□□□□ -1.96
MSM1YGR171C DBP7P36120 742 aaKnown RBP2.82□□□□□ -1.96
MSM1YGR171C HMT1P38074 348 aa2.82□□□□□ -1.96
MSM1YGR171C SOK1P40317 901 aa2.82□□□□□ -1.96
MSM1YGR171C YGR042WP53227 271 aa2.82□□□□□ -1.96
MSM1YGR171C RMI1Q02685 241 aa2.82□□□□□ -1.96
MSM1YGR171C YDC1Q02896 317 aa2.82□□□□□ -1.96
MSM1YGR171C YML108WQ03759 105 aa2.82□□□□□ -1.96
MSM1YGR171C SPG4Q04438 115 aa2.82□□□□□ -1.96
MSM1YGR171C RRP40Q08285 240 aaKnown RBP2.82□□□□□ -1.96
MSM1YGR171C YNG1Q08465 219 aa2.82□□□□□ -1.96
MSM1YGR171C GRE1Q08969 168 aa2.82□□□□□ -1.96
MSM1YGR171C RAD50P12753 1312 aa2.82□□□□□ -1.96
MSM1YGR171C YKR104WP0CE69 306 aa2.82□□□□□ -1.96
MSM1YGR171C YOX1P34161 385 aa2.82□□□□□ -1.96
MSM1YGR171C YKL075CP36083 450 aa2.82□□□□□ -1.96
MSM1YGR171C HEK2P38199 381 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
MSM1YGR171C SHE3P38272 425 aaKnown RBP2.82□□□□□ -1.96
MSM1YGR171C ATG12P38316 186 aa2.82□□□□□ -1.96
MSM1YGR171C GRE3P38715 327 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
MSM1YGR171C YAP3P38749 330 aa2.82□□□□□ -1.96
MSM1YGR171C PRE5P40302 234 aaKnown RBP2.82□□□□□ -1.96
MSM1YGR171C SDS23P53172 527 aa2.82□□□□□ -1.96
MSM1YGR171C YNR066CP53752 436 aa2.82□□□□□ -1.96
MSM1YGR171C SWS2P53937 143 aa2.82□□□□□ -1.96
MSM1YGR171C YLR460CP54007 376 aa2.82□□□□□ -1.96
MSM1YGR171C MRX11Q03079 207 aa2.82□□□□□ -1.96
MSM1YGR171C ARO80Q04052 950 aa2.82□□□□□ -1.96
MSM1YGR171C YLR036CQ07986 203 aa2.82□□□□□ -1.96
MSM1YGR171C MIM1Q08176 113 aa2.82□□□□□ -1.96
MSM1YGR171C TMC1Q08422 150 aaPredicted RBP2.82□□□□□ -1.96
MSM1YGR171C MMT2Q08970 484 aa2.82□□□□□ -1.96
MSM1YGR171C YDR018CQ12185 396 aa2.82□□□□□ -1.96
MSM1YGR171C SSN2P38931 1420 aa2.81□□□□□ -1.96
MSM1YGR171C GPI18P38211 433 aa2.81□□□□□ -1.96
MSM1YGR171C EFM1P38732 585 aa2.81□□□□□ -1.96
MSM1YGR171C GOS1P38736 223 aa2.81□□□□□ -1.96
MSM1YGR171C CPR7P47103 393 aa2.81□□□□□ -1.96
MSM1YGR171C NBP35P52920 328 aa2.81□□□□□ -1.96
MSM1YGR171C RCF2P53721 224 aa2.81□□□□□ -1.96
MSM1YGR171C PDR17P53844 350 aa2.81□□□□□ -1.96
MSM1YGR171C GIS2P53849 153 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
MSM1YGR171C YNL140CP53910 189 aa2.81□□□□□ -1.96
MSM1YGR171C DXO1Q06349 442 aa2.81□□□□□ -1.96
MSM1YGR171C ASP3-2P0CX77 362 aa2.8□□□□□ -1.96
MSM1YGR171C ASP3-3P0CX78 362 aa2.8□□□□□ -1.96
MSM1YGR171C ASP3-4P0CX79 362 aa2.8□□□□□ -1.96
MSM1YGR171C ASP3-1P0CZ17 362 aa2.8□□□□□ -1.96
MSM1YGR171C LDB16P25587 256 aa2.8□□□□□ -1.96
MSM1YGR171C MGT1P26188 188 aa2.8□□□□□ -1.96
MSM1YGR171C PRY2P36110 329 aa2.8□□□□□ -1.96
MSM1YGR171C SEN34P39707 275 aa2.8□□□□□ -1.96
MSM1YGR171C SBH2P52871 88 aa2.8□□□□□ -1.96
MSM1YGR171C RPL21AQ02753 160 aaKnown RBP2.8□□□□□ -1.96
MSM1YGR171C SNO1Q03144 224 aa2.8□□□□□ -1.96
MSM1YGR171C YMR279CQ03263 540 aa2.8□□□□□ -1.96
MSM1YGR171C YMR166CQ03829 368 aa2.8□□□□□ -1.96
MSM1YGR171C COQ10Q08058 207 aa2.8□□□□□ -1.96
MSM1YGR171C MDM32Q12171 622 aa2.8□□□□□ -1.96
MSM1YGR171C EMP46Q12396 444 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms