RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C BOP2Q06150 570 aa1.88□□□□□ -2.11
PRP38YGR075C CDD1Q06549 142 aa1.88□□□□□ -2.11
PRP38YGR075C ISD11Q6Q560 94 aa1.88□□□□□ -2.11
PRP38YGR075C SKI3P17883 1432 aaKnown RBP1.88□□□□□ -2.11
PRP38YGR075C NUP157P40064 1391 aaKnown RBP1.87□□□□□ -2.11
PRP38YGR075C XRN1P22147 1528 aaKnown RBP1.87□□□□□ -2.11
PRP38YGR075C POX1P13711 748 aa1.87□□□□□ -2.11
PRP38YGR075C PET117Q02771 107 aa1.87□□□□□ -2.11
PRP38YGR075C TRM732Q03496 1420 aa1.87□□□□□ -2.11
PRP38YGR075C FCF1Q05498 189 aaPredicted RBP1.87□□□□□ -2.11
PRP38YGR075C ATG17Q06410 417 aa1.87□□□□□ -2.11
PRP38YGR075C PAM18Q07914 168 aa1.87□□□□□ -2.11
PRP38YGR075C PLB3Q08108 686 aa1.87□□□□□ -2.11
PRP38YGR075C YPL150WQ12152 901 aa1.87□□□□□ -2.11
PRP38YGR075C TY3A-GQ12173 290 aa1.87□□□□□ -2.11
PRP38YGR075C SMT3Q12306 101 aaKnown RBP1.87□□□□□ -2.11
PRP38YGR075C TIM22Q12328 207 aa1.87□□□□□ -2.11
PRP38YGR075C TY3A-IQ99219 290 aa1.87□□□□□ -2.11
PRP38YGR075C DOP1Q03921 1698 aa1.86□□□□□ -2.11
PRP38YGR075C YEL009C-AA0A023PZF2 135 aa1.86□□□□□ -2.11
PRP38YGR075C HIS3P06633 220 aa1.86□□□□□ -2.11
PRP38YGR075C PPH21P23594 369 aa1.86□□□□□ -2.11
PRP38YGR075C TOM40P23644 387 aaKnown RBP1.86□□□□□ -2.11
PRP38YGR075C RSA4P25382 515 aaKnown RBP1.86□□□□□ -2.11
PRP38YGR075C JEN1P36035 616 aa1.86□□□□□ -2.11
PRP38YGR075C YBR096WP38256 230 aa1.86□□□□□ -2.11
PRP38YGR075C TEM1P38987 245 aa1.86□□□□□ -2.11
PRP38YGR075C LIA1P47120 325 aaKnown RBP1.86□□□□□ -2.11
PRP38YGR075C USE1P53146 245 aa1.86□□□□□ -2.11
PRP38YGR075C ASI3P53983 676 aa1.86□□□□□ -2.11
PRP38YGR075C KRE28Q04431 385 aa1.86□□□□□ -2.11
PRP38YGR075C COQ10Q08058 207 aa1.86□□□□□ -2.11
PRP38YGR075C YOL019WQ08157 551 aa1.86□□□□□ -2.11
PRP38YGR075C NOT5Q12514 560 aaPredicted RBP1.86□□□□□ -2.11
PRP38YGR075C YPL247CQ12523 523 aa1.86□□□□□ -2.11
PRP38YGR075C TOM1Q03280 3268 aa1.85□□□□□ -2.11
PRP38YGR075C ESP1Q03018 1630 aa1.85□□□□□ -2.11
PRP38YGR075C YKR104WP0CE69 306 aa1.85□□□□□ -2.11
PRP38YGR075C SFC1P33303 322 aa1.85□□□□□ -2.11
PRP38YGR075C CAB3P36076 571 aa1.85□□□□□ -2.11
PRP38YGR075C DRE2P36152 348 aa1.85□□□□□ -2.11
PRP38YGR075C ECM13P38195 257 aa1.85□□□□□ -2.11
PRP38YGR075C FZO1P38297 855 aa1.85□□□□□ -2.11
PRP38YGR075C GOS1P38736 223 aa1.85□□□□□ -2.11
PRP38YGR075C THO1P40040 218 aaKnown RBP1.85□□□□□ -2.11
PRP38YGR075C YJL028WP47062 111 aa1.85□□□□□ -2.11
PRP38YGR075C HOC1P47124 396 aa1.85□□□□□ -2.11
PRP38YGR075C JHD2P47156 728 aaPredicted RBP1.85□□□□□ -2.11
PRP38YGR075C NIF3P53081 288 aa1.85□□□□□ -2.11
PRP38YGR075C MRPL50P53724 139 aa1.85□□□□□ -2.11
PRP38YGR075C CTF19Q02732 369 aa1.85□□□□□ -2.11
PRP38YGR075C EMI1Q04406 187 aa1.85□□□□□ -2.11
PRP38YGR075C YLR283WQ05867 314 aa1.85□□□□□ -2.11
PRP38YGR075C YPR098CQ06089 161 aa1.85□□□□□ -2.11
PRP38YGR075C YCT1Q12235 531 aa1.85□□□□□ -2.11
PRP38YGR075C AGC1Q12482 902 aa1.85□□□□□ -2.11
PRP38YGR075C YPR117WQ06116 2489 aa1.85□□□□□ -2.11
PRP38YGR075C TCP1P12612 559 aaKnown RBP1.84□□□□□ -2.11
PRP38YGR075C RPO26P20435 155 aa1.84□□□□□ -2.11
PRP38YGR075C DPB2P24482 689 aaPredicted RBP1.84□□□□□ -2.11
PRP38YGR075C RPS5P26783 225 aaKnown RBP1.84□□□□□ -2.11
PRP38YGR075C GDH2P33327 1092 aaKnown RBP1.84□□□□□ -2.11
PRP38YGR075C BFR1P38934 470 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
PRP38YGR075C YJR079WP47126 109 aa1.84□□□□□ -2.11
PRP38YGR075C MRH4P53166 561 aa1.84□□□□□ -2.11
PRP38YGR075C SPG4Q04438 115 aa1.84□□□□□ -2.11
PRP38YGR075C YPR147CQ06522 304 aaKnown RBP1.84□□□□□ -2.11
PRP38YGR075C NUP170P38181 1502 aa1.84□□□□□ -2.11
PRP38YGR075C DNF3Q12674 1656 aa1.83□□□□□ -2.12
PRP38YGR075C NUP159P40477 1460 aa1.83□□□□□ -2.12
PRP38YGR075C YCR016WP25617 290 aaKnown RBP1.83□□□□□ -2.12
PRP38YGR075C MSN4P33749 630 aa1.83□□□□□ -2.12
PRP38YGR075C YKL075CP36083 450 aa1.83□□□□□ -2.12
PRP38YGR075C LDB7P38210 180 aa1.83□□□□□ -2.12
PRP38YGR075C SNZ3P43545 298 aa1.83□□□□□ -2.12
PRP38YGR075C MNN5P46982 586 aa1.83□□□□□ -2.12
PRP38YGR075C YGL034CP53186 121 aa1.83□□□□□ -2.12
PRP38YGR075C YDR124WQ04608 324 aa1.83□□□□□ -2.12
PRP38YGR075C RRP40Q08285 240 aaKnown RBP1.83□□□□□ -2.12
PRP38YGR075C SYC1Q08553 188 aaPredicted RBP1.83□□□□□ -2.12
PRP38YGR075C YOR268CQ08734 132 aa1.83□□□□□ -2.12
PRP38YGR075C SNU23Q12368 194 aaPredicted RBP1.83□□□□□ -2.12
PRP38YGR075C EMP46Q12396 444 aa1.83□□□□□ -2.12
PRP38YGR075C YBL008W-AQ3E821 79 aa1.83□□□□□ -2.12
PRP38YGR075C CFT1Q06632 1357 aaKnown RBP1.83□□□□□ -2.12
PRP38YGR075C ARO1P08566 1588 aaKnown RBP1.82□□□□□ -2.12
PRP38YGR075C RNP1P32385 249 aa1.82□□□□□ -2.12
PRP38YGR075C SGE1P33335 543 aa1.82□□□□□ -2.12
PRP38YGR075C MAL32P38158 584 aa1.82□□□□□ -2.12
PRP38YGR075C YHB1P39676 399 aaKnown RBP1.82□□□□□ -2.12
PRP38YGR075C YER085CP40058 173 aa1.82□□□□□ -2.12
PRP38YGR075C MDM34P53083 459 aa1.82□□□□□ -2.12
PRP38YGR075C MAL12P53341 584 aa1.82□□□□□ -2.12
PRP38YGR075C SNZ2P53824 298 aa1.82□□□□□ -2.12
PRP38YGR075C TIM11P81449 96 aaPredicted RBP1.82□□□□□ -2.12
PRP38YGR075C GOT1Q03554 138 aa1.82□□□□□ -2.12
PRP38YGR075C MYO5Q04439 1219 aaKnown RBP1.82□□□□□ -2.12
PRP38YGR075C TY2B-LR1P0C2J3 1770 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-FP0CX63 1770 aa1.82□□□□□ -2.12
PRP38YGR075C TY2B-GR2P0CX64 1770 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms