RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C TAX4P47030 604 aa4.4□□□□□ -1.71
SEC9YGR009C UBX6P47049 396 aa4.4□□□□□ -1.71
SEC9YGR009C YJR015WP47090 510 aa4.4□□□□□ -1.71
SEC9YGR009C SNN1P48232 102 aa4.4□□□□□ -1.71
SEC9YGR009C NUP57P48837 541 aa4.4□□□□□ -1.71
SEC9YGR009C USE1P53146 245 aa4.4□□□□□ -1.71
SEC9YGR009C YNR014WP53719 212 aa4.4□□□□□ -1.71
SEC9YGR009C HSK3P69852 69 aa4.4□□□□□ -1.71
SEC9YGR009C YPL067CQ02754 198 aa4.4□□□□□ -1.71
SEC9YGR009C ARC18Q05933 178 aaKnown RBP4.4□□□□□ -1.71
SEC9YGR009C POS5Q06892 414 aa4.4□□□□□ -1.71
SEC9YGR009C Q0142Q9ZZW4 58 aa4.4□□□□□ -1.71
SEC9YGR009C STE7P06784 515 aa4.39□□□□□ -1.71
SEC9YGR009C ALG7P07286 448 aa4.39□□□□□ -1.71
SEC9YGR009C UBI4P0CG63 381 aaKnown RBP4.39□□□□□ -1.71
SEC9YGR009C AMD1P15274 810 aaKnown RBP4.39□□□□□ -1.71
SEC9YGR009C PHO85P17157 305 aa4.39□□□□□ -1.71
SEC9YGR009C PPH21P23594 369 aa4.39□□□□□ -1.71
SEC9YGR009C SAT4P25333 603 aaKnown RBP4.39□□□□□ -1.71
SEC9YGR009C TAH1P25638 111 aaPredicted RBP4.39□□□□□ -1.71
SEC9YGR009C GMH1P36125 273 aa4.39□□□□□ -1.71
SEC9YGR009C YER189WP40104 122 aa4.39□□□□□ -1.71
SEC9YGR009C HYR1P40581 163 aaKnown RBP4.39□□□□□ -1.71
SEC9YGR009C YFR020WP43600 232 aa4.39□□□□□ -1.71
SEC9YGR009C GWT1P47026 490 aa4.39□□□□□ -1.71
SEC9YGR009C SCS3P53012 380 aa4.39□□□□□ -1.71
SEC9YGR009C RSC9Q03124 581 aa4.39□□□□□ -1.71
SEC9YGR009C RNH202Q05635 350 aa4.39□□□□□ -1.71
SEC9YGR009C ERF2Q06551 359 aa4.39□□□□□ -1.71
SEC9YGR009C STP4Q07351 490 aa4.39□□□□□ -1.71
SEC9YGR009C RAD28Q12021 506 aa4.39□□□□□ -1.71
SEC9YGR009C DET1Q99288 334 aaKnown RBP4.39□□□□□ -1.71
SEC9YGR009C Q0182Q9ZZW1 134 aa4.39□□□□□ -1.71
SEC9YGR009C CDC6P09119 513 aa4.38□□□□□ -1.71
SEC9YGR009C ATR1P13090 542 aa4.38□□□□□ -1.71
SEC9YGR009C SPT15P13393 240 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C YSC83P32792 385 aa4.38□□□□□ -1.71
SEC9YGR009C CUE1P38428 203 aa4.38□□□□□ -1.71
SEC9YGR009C SHU2P38957 223 aa4.38□□□□□ -1.71
SEC9YGR009C HPA3P39979 161 aa4.38□□□□□ -1.71
SEC9YGR009C YIR007WP40566 764 aa4.38□□□□□ -1.71
SEC9YGR009C MTM1P53320 366 aa4.38□□□□□ -1.71
SEC9YGR009C SUR7P54003 302 aa4.38□□□□□ -1.71
SEC9YGR009C VPS28Q02767 242 aa4.38□□□□□ -1.71
SEC9YGR009C TY1A-DR2Q03964 440 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C CTR3Q06686 241 aa4.38□□□□□ -1.71
SEC9YGR009C YLR149CQ99296 730 aa4.38□□□□□ -1.71
SEC9YGR009C STU1P38198 1513 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-HO13535 1793 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-DR5P0C2I2 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-DR6P0C2I3 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-LR2P0C2I5 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-LR3P0C2I6 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TY1B-PR1P0C2I9 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TY1B-PR3P0C2J1 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TY1B-JR1P47098 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-ML2Q03434 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TY1B-ER1Q03612 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-ML1Q04711 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TY1B-GR2Q12269 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-OLQ12273 1755 aa4.38□□□□□ -1.71
SEC9YGR009C TY1B-PLQ12414 1755 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C DIF1O13577 133 aa4.38□□□□□ -1.71
SEC9YGR009C YFL068WP0CX99 160 aa4.38□□□□□ -1.71
SEC9YGR009C YLL066W-AP0CY00 160 aa4.38□□□□□ -1.71
SEC9YGR009C YLL067W-AP0CY01 160 aa4.38□□□□□ -1.71
SEC9YGR009C SPO12P17123 173 aa4.38□□□□□ -1.71
SEC9YGR009C YCL002CP25565 263 aa4.38□□□□□ -1.71
SEC9YGR009C MUD1P32605 298 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C TKL2P33315 681 aa4.38□□□□□ -1.71
SEC9YGR009C YKL187CP34231 750 aa4.38□□□□□ -1.71
SEC9YGR009C YJR012CP47087 207 aa4.38□□□□□ -1.71
SEC9YGR009C DAN1P47178 298 aa4.38□□□□□ -1.71
SEC9YGR009C OST3P48439 350 aa4.38□□□□□ -1.71
SEC9YGR009C TAM41P53230 385 aa4.38□□□□□ -1.71
SEC9YGR009C YNL165WP53891 406 aa4.38□□□□□ -1.71
SEC9YGR009C COF1Q03048 143 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C DOT1Q04089 582 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C GAL83Q04739 417 aa4.38□□□□□ -1.71
SEC9YGR009C EMG1Q06287 252 aaKnown RBP4.38□□□□□ -1.71
SEC9YGR009C YLR118CQ12354 227 aa4.38□□□□□ -1.71
SEC9YGR009C YBR085C-AO43137 85 aa4.37□□□□□ -1.71
SEC9YGR009C SGA1P08019 549 aa4.37□□□□□ -1.71
SEC9YGR009C HAP3P13434 144 aa4.37□□□□□ -1.71
SEC9YGR009C COQ2P32378 372 aa4.37□□□□□ -1.71
SEC9YGR009C VFA1P40080 203 aa4.37□□□□□ -1.71
SEC9YGR009C GAT2P40209 560 aa4.37□□□□□ -1.71
SEC9YGR009C TIF34P40217 347 aaKnown RBP4.37□□□□□ -1.71
SEC9YGR009C FAR3P46671 204 aa4.37□□□□□ -1.71
SEC9YGR009C YGL101WP53144 215 aa4.37□□□□□ -1.71
SEC9YGR009C KTR5P53966 522 aaPredicted RBP4.37□□□□□ -1.71
SEC9YGR009C YKR011CQ02209 353 aa4.37□□□□□ -1.71
SEC9YGR009C ECI1Q05871 280 aa4.37□□□□□ -1.71
SEC9YGR009C YOR342CQ12182 319 aa4.37□□□□□ -1.71
SEC9YGR009C YLL058WQ12198 575 aa4.37□□□□□ -1.71
SEC9YGR009C TY1A-NL1Q12391 440 aaKnown RBP4.37□□□□□ -1.71
SEC9YGR009C YDL085C-AQ3E7B7 68 aaKnown RBP4.37□□□□□ -1.71
SEC9YGR009C MTC7P32633 139 aa4.36□□□□□ -1.71
SEC9YGR009C TOA2P32774 122 aa4.36□□□□□ -1.71
SEC9YGR009C MRPL6P32904 214 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms