RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RRT12P25381 491 aa2.59□□□□□ -1.99
PRP18YGR006W MIG1P27705 504 aa2.59□□□□□ -1.99
PRP18YGR006W SDH4P37298 181 aa2.59□□□□□ -1.99
PRP18YGR006W MTW1P39731 289 aa2.59□□□□□ -1.99
PRP18YGR006W DSN1P40568 576 aa2.59□□□□□ -1.99
PRP18YGR006W RPL10P41805 221 aaKnown RBP2.59□□□□□ -1.99
PRP18YGR006W NOP13P53883 403 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
PRP18YGR006W DIA1P54005 336 aa2.59□□□□□ -1.99
PRP18YGR006W YPL039WQ03080 316 aa2.59□□□□□ -1.99
PRP18YGR006W GIM5Q04493 163 aa2.59□□□□□ -1.99
PRP18YGR006W PEX10Q05568 337 aa2.59□□□□□ -1.99
PRP18YGR006W PAM18Q07914 168 aa2.59□□□□□ -1.99
PRP18YGR006W BRX1Q08235 291 aaKnown RBP2.59□□□□□ -1.99
PRP18YGR006W HRT1Q08273 121 aa2.59□□□□□ -1.99
PRP18YGR006W FEX1Q08913 375 aa2.59□□□□□ -1.99
PRP18YGR006W FEX2Q08991 375 aa2.59□□□□□ -1.99
PRP18YGR006W YRA1Q12159 226 aaKnown RBP2.59□□□□□ -1.99
PRP18YGR006W HIS3P06633 220 aa2.58□□□□□ -2
PRP18YGR006W CDC33P07260 213 aaKnown RBP2.58□□□□□ -2
PRP18YGR006W KRE1P17260 313 aa2.58□□□□□ -2
PRP18YGR006W PBN1P25580 416 aa2.58□□□□□ -2
PRP18YGR006W HEK2P38199 381 aaKnown RBP RIP-Chip data2.58□□□□□ -2 RIP-Chip
PRP18YGR006W LDB7P38210 180 aa2.58□□□□□ -2
PRP18YGR006W PRS2P38620 318 aaKnown RBP2.58□□□□□ -2
PRP18YGR006W YLR283WQ05867 314 aa2.58□□□□□ -2
PRP18YGR006W SMT3Q12306 101 aaKnown RBP2.58□□□□□ -2
PRP18YGR006W COS2P0CX12 379 aa2.57□□□□□ -2
PRP18YGR006W COS3P0CX13 379 aa2.57□□□□□ -2
PRP18YGR006W CBF1P17106 351 aa2.57□□□□□ -2
PRP18YGR006W PRP18P33411 251 aaPredicted RBP2.57□□□□□ -2
PRP18YGR006W CBT1P36038 271 aaPredicted RBP2.57□□□□□ -2
PRP18YGR006W YHL049CP38722 271 aa2.57□□□□□ -2
PRP18YGR006W BIG1P38813 335 aa2.57□□□□□ -2
PRP18YGR006W EGD2P38879 174 aaKnown RBP2.57□□□□□ -2
PRP18YGR006W GLG2P47011 380 aa2.57□□□□□ -2
PRP18YGR006W MRPL50P53724 139 aa2.57□□□□□ -2
PRP18YGR006W AAH1P53909 347 aa2.57□□□□□ -2
PRP18YGR006W YOL019WQ08157 551 aa2.57□□□□□ -2
PRP18YGR006W SNF8Q12483 233 aa2.57□□□□□ -2
PRP18YGR006W YBL112CQ3E7Y4 105 aa2.57□□□□□ -2
PRP18YGR006W STE18P18852 110 aa2.56□□□□□ -2
PRP18YGR006W RPL24BP24000 155 aaKnown RBP2.56□□□□□ -2
PRP18YGR006W RPS5P26783 225 aaKnown RBP2.56□□□□□ -2
PRP18YGR006W SFC1P33303 322 aa2.56□□□□□ -2
PRP18YGR006W YKR032WP36127 104 aa2.56□□□□□ -2
PRP18YGR006W RIB1P38066 345 aa2.56□□□□□ -2
PRP18YGR006W MIC12P38341 106 aa2.56□□□□□ -2
PRP18YGR006W RTC3P38804 111 aaPredicted RBP2.56□□□□□ -2
PRP18YGR006W TEM1P38987 245 aa2.56□□□□□ -2
PRP18YGR006W YER084WP40057 128 aa2.56□□□□□ -2
PRP18YGR006W NIF3P53081 288 aa2.56□□□□□ -2
PRP18YGR006W YDR209CQ03480 137 aa2.56□□□□□ -2
PRP18YGR006W YMR226CQ05016 267 aaKnown RBP2.56□□□□□ -2
PRP18YGR006W CDD1Q06549 142 aa2.56□□□□□ -2
PRP18YGR006W GRE1Q08969 168 aa2.56□□□□□ -2
PRP18YGR006W SEY1Q99287 776 aa2.56□□□□□ -2
PRP18YGR006W RPL27AP0C2H6 136 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W RPL27BP0C2H7 136 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W TCP1P12612 559 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W POX1P13711 748 aa2.55□□□□□ -2
PRP18YGR006W FBA1P14540 359 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W DPB2P24482 689 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W ADE1P27616 306 aa2.55□□□□□ -2
PRP18YGR006W ATP7P30902 174 aa2.55□□□□□ -2
PRP18YGR006W QRI5P32344 111 aa2.55□□□□□ -2
PRP18YGR006W YPT52P36018 234 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W PRS4P38063 326 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W SEC72P39742 193 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W YIL001WP40560 513 aa2.55□□□□□ -2
PRP18YGR006W YJR141WP47172 347 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W CWC23P52868 283 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W SYF2P53277 215 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W PRM15Q03262 622 aa2.55□□□□□ -2
PRP18YGR006W EBS1Q03466 884 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W YMR166CQ03829 368 aa2.55□□□□□ -2
PRP18YGR006W FCF1Q05498 189 aaPredicted RBP2.55□□□□□ -2
PRP18YGR006W DCR2Q05924 578 aa2.55□□□□□ -2
PRP18YGR006W SDO1Q07953 250 aaKnown RBP2.55□□□□□ -2
PRP18YGR006W MSH5Q12175 901 aa2.55□□□□□ -2
PRP18YGR006W YPL119C-AQ3E751 87 aa2.55□□□□□ -2
PRP18YGR006W THP2O13539 261 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W RPL35AP0CX84 120 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W RPL35BP0CX85 120 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W SNF6P18888 332 aa2.54□□□□□ -2
PRP18YGR006W VMA6P32366 345 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W UTR5P32630 166 aa2.54□□□□□ -2
PRP18YGR006W UBC6P33296 250 aaPredicted RBP2.54□□□□□ -2
PRP18YGR006W VPS51P36116 164 aa2.54□□□□□ -2
PRP18YGR006W DRE2P36152 348 aa2.54□□□□□ -2
PRP18YGR006W MRX3P38172 270 aa2.54□□□□□ -2
PRP18YGR006W ERG28P40030 148 aa2.54□□□□□ -2
PRP18YGR006W YNL194CP40169 301 aa2.54□□□□□ -2
PRP18YGR006W YRB1P41920 201 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W YGL159WP53110 370 aa2.54□□□□□ -2
PRP18YGR006W SPO77Q06134 477 aa2.54□□□□□ -2
PRP18YGR006W ATG17Q06410 417 aa2.54□□□□□ -2
PRP18YGR006W ABP140Q08641 628 aaKnown RBP2.54□□□□□ -2
PRP18YGR006W HTB1P02293 131 aaKnown RBP2.53□□□□□ -2
PRP18YGR006W HTB2P02294 131 aa2.53□□□□□ -2
PRP18YGR006W TOM40P23644 387 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms