RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W NCE102Q12207 173 aaRIP-Chip data4.75□□□□□ -1.65not detected
SHE10YGL228W SPS2P08459 502 aa4.74□□□□□ -1.65
SHE10YGL228W NAB2P32505 525 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SHE10YGL228W AGA2P32781 87 aa4.74□□□□□ -1.65
SHE10YGL228W PPZ2P33329 710 aa4.74□□□□□ -1.65
SHE10YGL228W CLG1P35190 452 aa4.74□□□□□ -1.65
SHE10YGL228W APL3P38065 1025 aa4.74□□□□□ -1.65
SHE10YGL228W YBR096WP38256 230 aa4.74□□□□□ -1.65
SHE10YGL228W UMP1P38293 148 aa4.74□□□□□ -1.65
SHE10YGL228W YBR242WP38331 238 aa4.74□□□□□ -1.65
SHE10YGL228W GPI16P38875 610 aa4.74□□□□□ -1.65
SHE10YGL228W YND1P40009 630 aa4.74□□□□□ -1.65
SHE10YGL228W QDR1P40475 563 aa4.74□□□□□ -1.65
SHE10YGL228W SYS1P41544 203 aa4.74□□□□□ -1.65
SHE10YGL228W YFL051CP43552 160 aa4.74□□□□□ -1.65
SHE10YGL228W YNR048WP53740 393 aa4.74□□□□□ -1.65
SHE10YGL228W TY1A-DR2Q03964 440 aaKnown RBP4.74□□□□□ -1.65
SHE10YGL228W TY1A-MR1Q04215 440 aa4.74□□□□□ -1.65
SHE10YGL228W FIT3Q08907 204 aa4.74□□□□□ -1.65
SHE10YGL228W RNH203Q12338 110 aa4.74□□□□□ -1.65
SHE10YGL228W TDH3P00359 332 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
SHE10YGL228W RAD52P06778 471 aaKnown RBP4.73□□□□□ -1.65
SHE10YGL228W CHO1P08456 276 aa4.73□□□□□ -1.65
SHE10YGL228W RPL30P14120 105 aaKnown RBP4.73□□□□□ -1.65
SHE10YGL228W ARO3P14843 370 aaKnown RBP4.73□□□□□ -1.65
SHE10YGL228W SEN34P39707 275 aa4.73□□□□□ -1.65
SHE10YGL228W FLX1P40464 311 aa4.73□□□□□ -1.65
SHE10YGL228W AVT7P40501 490 aa4.73□□□□□ -1.65
SHE10YGL228W AIM25P47140 327 aa4.73□□□□□ -1.65
SHE10YGL228W AVT4P50944 713 aa4.73□□□□□ -1.65
SHE10YGL228W RPL6AQ02326 176 aaKnown RBP4.73□□□□□ -1.65
SHE10YGL228W YPL077CQ02831 240 aa4.73□□□□□ -1.65
SHE10YGL228W CRR1Q05790 422 aa4.73□□□□□ -1.65
SHE10YGL228W YLR031WQ07978 186 aa4.73□□□□□ -1.65
SHE10YGL228W SRL2Q12020 392 aa4.73□□□□□ -1.65
SHE10YGL228W COX17Q12287 69 aa4.73□□□□□ -1.65
SHE10YGL228W HUT1Q12520 339 aa4.73□□□□□ -1.65
SHE10YGL228W TDH2P00358 332 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W GCN3P14741 305 aa4.72□□□□□ -1.65
SHE10YGL228W RPI1P23250 407 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W DEG1P31115 442 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W VMA5P31412 392 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W RTG1P32607 177 aa4.72□□□□□ -1.65
SHE10YGL228W YBL010CP32788 280 aa4.72□□□□□ -1.65
SHE10YGL228W VAM7P32912 316 aa4.72□□□□□ -1.65
SHE10YGL228W PPQ1P32945 549 aa4.72□□□□□ -1.65
SHE10YGL228W SOL3P38858 249 aa4.72□□□□□ -1.65
SHE10YGL228W OST1P41543 476 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W SIP18P50263 79 aa4.72□□□□□ -1.65
SHE10YGL228W NSA1P53136 463 aaPredicted RBP4.72□□□□□ -1.65
SHE10YGL228W TYW3P53177 273 aa4.72□□□□□ -1.65
SHE10YGL228W ALG12P53730 551 aa4.72□□□□□ -1.65
SHE10YGL228W NGL2Q03264 515 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W HAS1Q03532 505 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W TGS1Q12052 315 aa4.72□□□□□ -1.65
SHE10YGL228W ERP4Q12450 207 aa4.72□□□□□ -1.65
SHE10YGL228W URA6P15700 204 aa4.72□□□□□ -1.65
SHE10YGL228W RNA14P25298 677 aaKnown RBP4.72□□□□□ -1.65
SHE10YGL228W YKL063CP35725 167 aa4.72□□□□□ -1.65
SHE10YGL228W MCH2P36032 473 aa4.72□□□□□ -1.65
SHE10YGL228W SRL3P36167 246 aa4.72□□□□□ -1.65
SHE10YGL228W FIG1P38224 298 aa4.72□□□□□ -1.65
SHE10YGL228W MRPS16Q02608 121 aa4.72□□□□□ -1.65
SHE10YGL228W YDR391CQ04170 232 aa4.72□□□□□ -1.65
SHE10YGL228W YPR196WQ06595 470 aa4.72□□□□□ -1.65
SHE10YGL228W RSC58Q07979 502 aa4.72□□□□□ -1.65
SHE10YGL228W SCM3Q12334 223 aa4.72□□□□□ -1.65
SHE10YGL228W REP2P03872 296 aa4.71□□□□□ -1.66
SHE10YGL228W RPL35AP0CX84 120 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W RPL35BP0CX85 120 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W MSI1P13712 422 aa4.71□□□□□ -1.66
SHE10YGL228W CDC23P16522 626 aa4.71□□□□□ -1.66
SHE10YGL228W HNM1P19807 563 aa4.71□□□□□ -1.66
SHE10YGL228W SAG1P20840 650 aa4.71□□□□□ -1.66
SHE10YGL228W GLC7P32598 312 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W MRPL3P36516 390 aa4.71□□□□□ -1.66
SHE10YGL228W MRPL36P36531 177 aa4.71□□□□□ -1.66
SHE10YGL228W TOK1P40310 691 aa4.71□□□□□ -1.66
SHE10YGL228W MID1P41821 548 aa4.71□□□□□ -1.66
SHE10YGL228W UFD1P53044 361 aa4.71□□□□□ -1.66
SHE10YGL228W MEH1Q02205 184 aa4.71□□□□□ -1.66
SHE10YGL228W HNT1Q04344 158 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W MRX9Q07349 420 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W USB1Q12208 290 aaKnown RBP4.71□□□□□ -1.66
SHE10YGL228W RDI1Q12434 202 aa4.71□□□□□ -1.66
SHE10YGL228W CDC28P00546 298 aaKnown RBP4.7□□□□□ -1.66
SHE10YGL228W GCD1P09032 578 aaPredicted RBP4.7□□□□□ -1.66
SHE10YGL228W YLL053CP0CD98 152 aa4.7□□□□□ -1.66
SHE10YGL228W NHP6BP11633 99 aaKnown RBP4.7□□□□□ -1.66
SHE10YGL228W RFA1P22336 621 aaKnown RBP4.7□□□□□ -1.66
SHE10YGL228W FMT1P32785 401 aa4.7□□□□□ -1.66
SHE10YGL228W REC114P32841 428 aa4.7□□□□□ -1.66
SHE10YGL228W CLB6P32943 380 aa4.7□□□□□ -1.66
SHE10YGL228W MRPL27P36526 146 aaPredicted RBP4.7□□□□□ -1.66
SHE10YGL228W YHL037CP38733 133 aa4.7□□□□□ -1.66
SHE10YGL228W PIG2P40187 538 aa4.7□□□□□ -1.66
SHE10YGL228W YIP5P53108 310 aa4.7□□□□□ -1.66
SHE10YGL228W OKP1P53298 406 aa4.7□□□□□ -1.66
SHE10YGL228W RSM27P53305 110 aa4.7□□□□□ -1.66
SHE10YGL228W ARG5,6Q01217 863 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms