RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C IKI1P38874 309 aa1.02□□□□□ -2.25
SEC3YER008C SOP4P39543 234 aaPredicted RBP1.02□□□□□ -2.25
SEC3YER008C YIA6P40556 373 aa1.02□□□□□ -2.25
SEC3YER008C SFH5P47008 294 aa1.02□□□□□ -2.25
SEC3YER008C YPT32P51996 222 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C YLR152CP54072 576 aa1.02□□□□□ -2.25
SEC3YER008C GMC1Q04399 608 aa1.02□□□□□ -2.25
SEC3YER008C PEX10Q05568 337 aa1.02□□□□□ -2.25
SEC3YER008C RIF2Q06208 395 aa1.02□□□□□ -2.25
SEC3YER008C YPR011CQ12251 326 aa1.02□□□□□ -2.25
SEC3YER008C RAX2Q12465 1220 aa1.02□□□□□ -2.25
SEC3YER008C CMC2Q3E7A4 109 aa1.02□□□□□ -2.25
SEC3YER008C AI5_BETAQ9ZZX0 354 aa1.02□□□□□ -2.25
SEC3YER008C YFL068WP0CX99 160 aa1.02□□□□□ -2.25
SEC3YER008C YLL066W-AP0CY00 160 aa1.02□□□□□ -2.25
SEC3YER008C YLL067W-AP0CY01 160 aa1.02□□□□□ -2.25
SEC3YER008C MEI4P29467 408 aa1.02□□□□□ -2.25
SEC3YER008C NUP2P32499 720 aa1.02□□□□□ -2.25
SEC3YER008C SGE1P33335 543 aa1.02□□□□□ -2.25
SEC3YER008C DBP7P36120 742 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C MRX3P38172 270 aa1.02□□□□□ -2.25
SEC3YER008C RCK1P38622 512 aa1.02□□□□□ -2.25
SEC3YER008C SRP14P38985 146 aa1.02□□□□□ -2.25
SEC3YER008C THO1P40040 218 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C DDI1P40087 428 aa1.02□□□□□ -2.25
SEC3YER008C YER186CP40101 306 aa1.02□□□□□ -2.25
SEC3YER008C YIL012WP40551 113 aa1.02□□□□□ -2.25
SEC3YER008C MGA1P53050 456 aa1.02□□□□□ -2.25
SEC3YER008C SYF2P53277 215 aaPredicted RBP1.02□□□□□ -2.25
SEC3YER008C COQ10Q08058 207 aa1.02□□□□□ -2.25
SEC3YER008C RRS1Q08746 203 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C MMT2Q08970 484 aa1.02□□□□□ -2.25
SEC3YER008C TPT1Q12272 230 aaKnown RBP1.02□□□□□ -2.25
SEC3YER008C HMS1Q12398 434 aa1.02□□□□□ -2.25
SEC3YER008C PAB1P04147 577 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
SEC3YER008C GCY1P14065 312 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
SEC3YER008C ATP7P30902 174 aa1.01□□□□□ -2.25
SEC3YER008C CSE1P33307 960 aa1.01□□□□□ -2.25
SEC3YER008C MAM33P40513 266 aa1.01□□□□□ -2.25
SEC3YER008C BNS1P50084 137 aa1.01□□□□□ -2.25
SEC3YER008C USE1P53146 245 aa1.01□□□□□ -2.25
SEC3YER008C NRM1P53718 249 aa1.01□□□□□ -2.25
SEC3YER008C DXO1Q06349 442 aa1.01□□□□□ -2.25
SEC3YER008C YPR091CQ06833 770 aa1.01□□□□□ -2.25
SEC3YER008C EAF3Q12432 401 aa1.01□□□□□ -2.25
SEC3YER008C YPR064WQ12492 139 aa1.01□□□□□ -2.25
SEC3YER008C SOL2P37262 315 aa1.01□□□□□ -2.25
SEC3YER008C TDA11P38854 504 aa1.01□□□□□ -2.25
SEC3YER008C SEO1P39709 593 aa1.01□□□□□ -2.25
SEC3YER008C YND1P40009 630 aa1.01□□□□□ -2.25
SEC3YER008C YER076CP40049 302 aa1.01□□□□□ -2.25
SEC3YER008C RHO3Q00245 231 aaKnown RBP1.01□□□□□ -2.25
SEC3YER008C YPL077CQ02831 240 aa1.01□□□□□ -2.25
SEC3YER008C YPL113CQ02961 396 aa1.01□□□□□ -2.25
SEC3YER008C JLP1Q12358 412 aa1.01□□□□□ -2.25
SEC3YER008C CAT2P32796 670 aaKnown RBP1.01□□□□□ -2.25
SEC3YER008C PDC2P32896 925 aa1.01□□□□□ -2.25
SEC3YER008C FRM2P37261 193 aa1.01□□□□□ -2.25
SEC3YER008C PET100P38958 111 aa1.01□□□□□ -2.25
SEC3YER008C VAB2P40003 282 aa1.01□□□□□ -2.25
SEC3YER008C HAC1P41546 238 aa1.01□□□□□ -2.25
SEC3YER008C SHY1P53266 389 aa1.01□□□□□ -2.25
SEC3YER008C CRH1P53301 507 aa1.01□□□□□ -2.25
SEC3YER008C TPS1Q00764 495 aaKnown RBP1.01□□□□□ -2.25
SEC3YER008C NOC4Q06512 552 aaPredicted RBP1.01□□□□□ -2.25
SEC3YER008C YOR292CQ08743 309 aa1.01□□□□□ -2.25
SEC3YER008C PER33Q12144 273 aa1.01□□□□□ -2.25
SEC3YER008C ATP16Q12165 160 aa1.01□□□□□ -2.25
SEC3YER008C YCT1Q12235 531 aa1.01□□□□□ -2.25
SEC3YER008C WTM1Q12363 437 aaKnown RBP1.01□□□□□ -2.25
SEC3YER008C PET20Q99373 253 aa1.01□□□□□ -2.25
SEC3YER008C CDC28P00546 298 aaKnown RBP1□□□□□ -2.25
SEC3YER008C MET2P08465 486 aa1□□□□□ -2.25
SEC3YER008C SNA3P14359 133 aa1□□□□□ -2.25
SEC3YER008C CMK2P22517 447 aa1□□□□□ -2.25
SEC3YER008C RPL16AP26784 199 aaKnown RBP1□□□□□ -2.25
SEC3YER008C SEC1P30619 724 aaKnown RBP1□□□□□ -2.25
SEC3YER008C YOX1P34161 385 aa1□□□□□ -2.25
SEC3YER008C KRE9P39005 276 aa1□□□□□ -2.25
SEC3YER008C YNL208WP40159 199 aaKnown RBP1□□□□□ -2.25
SEC3YER008C PGU1P47180 361 aa1□□□□□ -2.25
SEC3YER008C IBD2P53892 351 aa1□□□□□ -2.25
SEC3YER008C YDC1Q02896 317 aa1□□□□□ -2.25
SEC3YER008C PBA1Q05778 276 aa1□□□□□ -2.25
SEC3YER008C YPR098CQ06089 161 aa1□□□□□ -2.25
SEC3YER008C HEM25Q07534 307 aa1□□□□□ -2.25
SEC3YER008C YLR012CQ07927 99 aa1□□□□□ -2.25
SEC3YER008C ESA1Q08649 445 aa1□□□□□ -2.25
SEC3YER008C BI3Q9ZZW7 517 aa1□□□□□ -2.25
SEC3YER008C ISY1P21374 235 aaPredicted RBP1□□□□□ -2.25
SEC3YER008C YCR090CP25654 182 aaKnown RBP1□□□□□ -2.25
SEC3YER008C CHL4P38907 458 aa1□□□□□ -2.25
SEC3YER008C POG1P40473 351 aa1□□□□□ -2.25
SEC3YER008C AIM25P47140 327 aa1□□□□□ -2.25
SEC3YER008C SGT1Q08446 395 aa1□□□□□ -2.25
SEC3YER008C RPL15AP05748 204 aaKnown RBP1□□□□□ -2.25
SEC3YER008C RNA15P25299 296 aaPredicted RBP1□□□□□ -2.25
SEC3YER008C RBK1P25332 333 aa1□□□□□ -2.25
SEC3YER008C CPR4P25334 318 aa1□□□□□ -2.25
SEC3YER008C NAM9P27929 486 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms