RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W YDR209CQ03480 137 aa1.31□□□□□ -2.2
VPS52YDR484W EMP46Q12396 444 aa1.31□□□□□ -2.2
VPS52YDR484W POL30P15873 258 aaKnown RBP1.3□□□□□ -2.2
VPS52YDR484W RIB7P33312 244 aa1.3□□□□□ -2.2
VPS52YDR484W YOR062CP36025 268 aa1.3□□□□□ -2.2
VPS52YDR484W RCN1P36054 211 aa1.3□□□□□ -2.2
VPS52YDR484W MRH4P53166 561 aa1.3□□□□□ -2.2
VPS52YDR484W GOT1Q03554 138 aa1.3□□□□□ -2.2
VPS52YDR484W BTS1Q12051 335 aa1.3□□□□□ -2.2
VPS52YDR484W PUT1P09368 476 aa1.3□□□□□ -2.2
VPS52YDR484W YKR104WP0CE69 306 aa1.3□□□□□ -2.2
VPS52YDR484W SEC22P22214 214 aa1.3□□□□□ -2.2
VPS52YDR484W JEN1P36035 616 aa1.3□□□□□ -2.2
VPS52YDR484W MRX3P38172 270 aa1.3□□□□□ -2.2
VPS52YDR484W FZO1P38297 855 aa1.3□□□□□ -2.2
VPS52YDR484W YER189WP40104 122 aa1.3□□□□□ -2.2
VPS52YDR484W MEP1P40260 492 aa1.3□□□□□ -2.2
VPS52YDR484W SNX4P47057 423 aa1.3□□□□□ -2.2
VPS52YDR484W RSM10Q03201 203 aa1.3□□□□□ -2.2
VPS52YDR484W YPR098CQ06089 161 aa1.3□□□□□ -2.2
VPS52YDR484W SYC1Q08553 188 aaPredicted RBP1.3□□□□□ -2.2
VPS52YDR484W FKS1P38631 1876 aaKnown RBP1.3□□□□□ -2.2
VPS52YDR484W RNA15P25299 296 aaPredicted RBP1.29□□□□□ -2.2
VPS52YDR484W YCR102CP25608 368 aa1.29□□□□□ -2.2
VPS52YDR484W MRPL39P36533 70 aa1.29□□□□□ -2.2
VPS52YDR484W PRS4P38063 326 aaPredicted RBP1.29□□□□□ -2.2
VPS52YDR484W SMB1P40018 196 aaKnown RBP1.29□□□□□ -2.2
VPS52YDR484W ARC15P40518 154 aaRIP-Chip data1.29□□□□□ -2.2not detected
VPS52YDR484W CTF19Q02732 369 aa1.29□□□□□ -2.2
VPS52YDR484W DCR2Q05924 578 aa1.29□□□□□ -2.2
VPS52YDR484W KAP95Q06142 861 aaKnown RBP1.29□□□□□ -2.2
VPS52YDR484W COQ10Q08058 207 aa1.29□□□□□ -2.2
VPS52YDR484W MHT1Q12525 324 aa1.29□□□□□ -2.2
VPS52YDR484W YLR462WO13556 202 aa1.28□□□□□ -2.2
VPS52YDR484W MSF1P08425 469 aa1.28□□□□□ -2.2
VPS52YDR484W HOM6P31116 359 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W YHB1P39676 399 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W YEL075CP39972 122 aa1.28□□□□□ -2.2
VPS52YDR484W THO1P40040 218 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W SNZ3P43545 298 aa1.28□□□□□ -2.2
VPS52YDR484W YGL034CP53186 121 aa1.28□□□□□ -2.2
VPS52YDR484W PRM15Q03262 622 aa1.28□□□□□ -2.2
VPS52YDR484W RRP40Q08285 240 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W BBP1Q12365 385 aa1.28□□□□□ -2.2
VPS52YDR484W SGE1P33335 543 aa1.28□□□□□ -2.2
VPS52YDR484W BAT2P47176 376 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W USE1P53146 245 aa1.28□□□□□ -2.2
VPS52YDR484W YGR026WP53217 278 aa1.28□□□□□ -2.2
VPS52YDR484W YMR279CQ03263 540 aa1.28□□□□□ -2.2
VPS52YDR484W SPG4Q04438 115 aa1.28□□□□□ -2.2
VPS52YDR484W FAR8Q05040 523 aa1.28□□□□□ -2.2
VPS52YDR484W SDO1Q07953 250 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W RRS1Q08746 203 aaKnown RBP1.28□□□□□ -2.2
VPS52YDR484W RRP36Q12481 300 aaPredicted RBP1.28□□□□□ -2.2
VPS52YDR484W YHR086W-AQ3E746 53 aa1.28□□□□□ -2.2
VPS52YDR484W Q0255P03881 472 aa1.27□□□□□ -2.21
VPS52YDR484W RSR1P13856 272 aa1.27□□□□□ -2.21
VPS52YDR484W DOA4P32571 926 aa1.27□□□□□ -2.21
VPS52YDR484W BIG1P38813 335 aa1.27□□□□□ -2.21
VPS52YDR484W GLG2P47011 380 aa1.27□□□□□ -2.21
VPS52YDR484W YJL027CP47063 138 aaPredicted RBP1.27□□□□□ -2.21
VPS52YDR484W DAD3P69850 94 aa1.27□□□□□ -2.21
VPS52YDR484W YLR179CQ06252 201 aaKnown RBP1.27□□□□□ -2.21
VPS52YDR484W CSM4Q08955 156 aa1.27□□□□□ -2.21
VPS52YDR484W SNU23Q12368 194 aaPredicted RBP1.27□□□□□ -2.21
VPS52YDR484W SWI1P09547 1314 aa1.27□□□□□ -2.21
VPS52YDR484W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
VPS52YDR484W GOS1P38736 223 aa1.27□□□□□ -2.21
VPS52YDR484W FCY21P40039 528 aa1.27□□□□□ -2.21
VPS52YDR484W SNZ2P53824 298 aa1.27□□□□□ -2.21
VPS52YDR484W YOR186WQ08560 144 aa1.27□□□□□ -2.21
VPS52YDR484W YCT1Q12235 531 aa1.27□□□□□ -2.21
VPS52YDR484W YOL107WQ12239 342 aa1.27□□□□□ -2.21
VPS52YDR484W BOL1Q3E793 110 aa1.27□□□□□ -2.21
VPS52YDR484W ADH3P07246 375 aaKnown RBP1.26□□□□□ -2.21
VPS52YDR484W EHD3P28817 500 aa1.26□□□□□ -2.21
VPS52YDR484W YHR125WP38831 101 aa1.26□□□□□ -2.21
VPS52YDR484W RMR1P53060 241 aa1.26□□□□□ -2.21
VPS52YDR484W YHR032W-AP0C5N6 59 aa1.25□□□□□ -2.21
VPS52YDR484W ERG24P32462 438 aaKnown RBP1.25□□□□□ -2.21
VPS52YDR484W YUH1P35127 236 aa1.25□□□□□ -2.21
VPS52YDR484W MSA2P36157 363 aa1.25□□□□□ -2.21
VPS52YDR484W BFR1P38934 470 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21 RIP-Chip
VPS52YDR484W YGL159WP53110 370 aa1.25□□□□□ -2.21
VPS52YDR484W RHO3Q00245 231 aaKnown RBP1.25□□□□□ -2.21
VPS52YDR484W AKR2Q12013 749 aa1.25□□□□□ -2.21
VPS52YDR484W YBR096WP38256 230 aa1.25□□□□□ -2.21
VPS52YDR484W GTR2P53290 341 aa1.25□□□□□ -2.21
VPS52YDR484W MRPL50P53724 139 aa1.25□□□□□ -2.21
VPS52YDR484W INM2Q05533 292 aa1.25□□□□□ -2.21
VPS52YDR484W YPL257WQ08974 193 aa1.25□□□□□ -2.21
VPS52YDR484W MSH5Q12175 901 aa1.25□□□□□ -2.21
VPS52YDR484W COX5AP00424 153 aa1.24□□□□□ -2.21
VPS52YDR484W VMA11P32842 164 aa1.24□□□□□ -2.21
VPS52YDR484W DOG1P38774 246 aa1.24□□□□□ -2.21
VPS52YDR484W YHR127WP38833 243 aaKnown RBP1.24□□□□□ -2.21
VPS52YDR484W FIS1P40515 155 aa1.24□□□□□ -2.21
VPS52YDR484W SMD3P43321 101 aaKnown RBP1.24□□□□□ -2.21
VPS52YDR484W YPR172WQ06608 200 aa1.24□□□□□ -2.21
VPS52YDR484W YLR030WQ07967 263 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms