RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	ECM13	P38195	257 aa		3.18	□□□□□ -1.9
LSM6	YDR378C	GON7	P46984	123 aa		3.18	□□□□□ -1.9
LSM6	YDR378C	SRL4	Q03085	281 aa		3.18	□□□□□ -1.9
LSM6	YDR378C	GOT1	Q03554	138 aa		3.18	□□□□□ -1.9
LSM6	YDR378C	GRH1	Q04410	372 aa	Known RBP	3.18	□□□□□ -1.9
LSM6	YDR378C	YMR114C	Q04471	368 aa	Known RBP	3.18	□□□□□ -1.9
LSM6	YDR378C	MRH4	P53166	561 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	SNZ2	P53824	298 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	KRE28	Q04431	385 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	SPG4	Q04438	115 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	SPO77	Q06134	477 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	YOR268C	Q08734	132 aa		3.17	□□□□□ -1.9
LSM6	YDR378C	EHD3	P28817	500 aa		3.16	□□□□□ -1.9
LSM6	YDR378C	YHB1	P39676	399 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	THO1	P40040	218 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	LIA1	P47120	325 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	RHO3	Q00245	231 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	CTF19	Q02732	369 aa		3.16	□□□□□ -1.9
LSM6	YDR378C	PET117	Q02771	107 aa		3.16	□□□□□ -1.9
LSM6	YDR378C	MYO5	Q04439	1219 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	CDD1	Q06549	142 aa		3.16	□□□□□ -1.9
LSM6	YDR378C	RRP40	Q08285	240 aa	Known RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	SYC1	Q08553	188 aa	Predicted RBP	3.16	□□□□□ -1.9
LSM6	YDR378C	DPM1	P14020	267 aa	Known RBP	3.15	□□□□□ -1.91
LSM6	YDR378C	SRB4	P32569	687 aa		3.15	□□□□□ -1.91
LSM6	YDR378C	YBR096W	P38256	230 aa		3.15	□□□□□ -1.91
LSM6	YDR378C	GOS1	P38736	223 aa		3.15	□□□□□ -1.91
LSM6	YDR378C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
LSM6	YDR378C	RDS3	Q06835	107 aa	Predicted RBP	3.15	□□□□□ -1.91
LSM6	YDR378C	YCR016W	P25617	290 aa	Known RBP	3.14	□□□□□ -1.91
LSM6	YDR378C	YGP1	P38616	354 aa	Known RBP	3.14	□□□□□ -1.91
LSM6	YDR378C	YER189W	P40104	122 aa		3.14	□□□□□ -1.91
LSM6	YDR378C	TY3A-G	Q12173	290 aa		3.14	□□□□□ -1.91
LSM6	YDR378C	TY3A-I	Q99219	290 aa		3.14	□□□□□ -1.91
LSM6	YDR378C	RPL26A	P05743	127 aa	Known RBP	3.13	□□□□□ -1.91
LSM6	YDR378C	TCP1	P12612	559 aa	Known RBP	3.13	□□□□□ -1.91
LSM6	YDR378C	MED6	P38782	295 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	YHR127W	P38833	243 aa	Known RBP	3.13	□□□□□ -1.91
LSM6	YDR378C	YJL016W	P47072	561 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	DSK2	P48510	373 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	NUP84	P52891	726 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	YGL034C	P53186	121 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	RPL26B	P53221	127 aa	Known RBP	3.13	□□□□□ -1.91
LSM6	YDR378C	YLR179C	Q06252	201 aa	Known RBP	3.13	□□□□□ -1.91
LSM6	YDR378C	EMP46	Q12396	444 aa		3.13	□□□□□ -1.91
LSM6	YDR378C	SEC22	P22214	214 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	RCN1	P36054	211 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	COG3	P40094	801 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	HOC1	P47124	396 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	YJR079W	P47126	109 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	JHD2	P47156	728 aa	Predicted RBP	3.12	□□□□□ -1.91
LSM6	YDR378C	SUE1	Q06524	206 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	YOR186W	Q08560	144 aa		3.12	□□□□□ -1.91
LSM6	YDR378C	CLB6	P32943	380 aa		3.11	□□□□□ -1.91
LSM6	YDR378C	LDB7	P38210	180 aa		3.11	□□□□□ -1.91
LSM6	YDR378C	TIF34	P40217	347 aa	Known RBP	3.11	□□□□□ -1.91
LSM6	YDR378C	OST2	P46964	130 aa		3.11	□□□□□ -1.91
LSM6	YDR378C	SAS5	Q99314	248 aa		3.11	□□□□□ -1.91
LSM6	YDR378C	SWI1	P09547	1314 aa		3.11	□□□□□ -1.91
LSM6	YDR378C	YLR462W	O13556	202 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	MSN4	P33749	630 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	COS8	P38723	381 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	YEL075C	P39972	122 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	PEX12	Q04370	399 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	YLR283W	Q05867	314 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	BBP1	Q12365	385 aa		3.1	□□□□□ -1.91
LSM6	YDR378C	CFT1	Q06632	1357 aa	Known RBP	3.1	□□□□□ -1.91
LSM6	YDR378C	SGA1	P08019	549 aa		3.09	□□□□□ -1.91
LSM6	YDR378C	MRPL25	P23369	157 aa		3.09	□□□□□ -1.91
LSM6	YDR378C	IGO1	P53897	168 aa		3.09	□□□□□ -1.91
LSM6	YDR378C	RGM1	Q00453	211 aa		3.09	□□□□□ -1.91
LSM6	YDR378C	CUE1	P38428	203 aa		3.08	□□□□□ -1.92
LSM6	YDR378C	YHL026C	P38740	315 aa		3.08	□□□□□ -1.92
LSM6	YDR378C	YJR146W	P47174	117 aa		3.08	□□□□□ -1.92
LSM6	YDR378C	YER085C	P40058	173 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	YMR144W	P40214	342 aa	Known RBP	3.07	□□□□□ -1.92
LSM6	YDR378C	SLM2	P53955	656 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	RSM10	Q03201	203 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	FAR8	Q05040	523 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	SEI1	Q06058	285 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	VPS68	Q12016	184 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	YLR126C	Q12288	251 aa		3.07	□□□□□ -1.92
LSM6	YDR378C	IPP1	P00817	287 aa	Known RBP	3.06	□□□□□ -1.92
LSM6	YDR378C	SNF6	P18888	332 aa		3.06	□□□□□ -1.92
LSM6	YDR378C	YKL075C	P36083	450 aa		3.06	□□□□□ -1.92
LSM6	YDR378C	MRPL49	P40858	161 aa	Predicted RBP	3.06	□□□□□ -1.92
LSM6	YDR378C	YNL046W	P53956	172 aa		3.06	□□□□□ -1.92
LSM6	YDR378C	MATALPHA1	P0CY06	175 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	HMLALPHA1	P0CY07	175 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	MSA2	P36157	363 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	ARC15	P40518	154 aa	RIP-Chip data	3.05	□□□□□ -1.92	not detected
LSM6	YDR378C	YGL159W	P53110	370 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	CAB4	P53332	305 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	YPL257W	Q08974	193 aa		3.05	□□□□□ -1.92
LSM6	YDR378C	CCA1	P21269	546 aa		3.04	□□□□□ -1.92
LSM6	YDR378C	YCR102C	P25608	368 aa		3.04	□□□□□ -1.92
LSM6	YDR378C	ERG24	P32462	438 aa	Known RBP	3.04	□□□□□ -1.92
LSM6	YDR378C	RMR1	P53060	241 aa		3.04	□□□□□ -1.92
LSM6	YDR378C	COS6	P53344	381 aa		3.04	□□□□□ -1.92
LSM6	YDR378C	INM2	Q05533	292 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms