RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C RPL10P41805 221 aaKnown RBP1.09□□□□□ -2.24
SWI5YDR146C DAN1P47178 298 aa1.09□□□□□ -2.24
SWI5YDR146C DCR2Q05924 578 aa1.09□□□□□ -2.24
SWI5YDR146C SPO77Q06134 477 aa1.09□□□□□ -2.24
SWI5YDR146C SUE1Q06524 206 aa1.09□□□□□ -2.24
SWI5YDR146C CSM4Q08955 156 aa1.09□□□□□ -2.24
SWI5YDR146C YPR011CQ12251 326 aa1.09□□□□□ -2.24
SWI5YDR146C RAD3P06839 778 aa1.08□□□□□ -2.24
SWI5YDR146C RSR1P13856 272 aa1.08□□□□□ -2.24
SWI5YDR146C CWP1P28319 239 aa1.08□□□□□ -2.24
SWI5YDR146C JEN1P36035 616 aa1.08□□□□□ -2.24
SWI5YDR146C GRE3P38715 327 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
SWI5YDR146C BIG1P38813 335 aa1.08□□□□□ -2.24
SWI5YDR146C FCY21P40039 528 aa1.08□□□□□ -2.24
SWI5YDR146C JHD2P47156 728 aaPredicted RBP1.08□□□□□ -2.24
SWI5YDR146C DSK2P48510 373 aa1.08□□□□□ -2.24
SWI5YDR146C SLM2P53955 656 aa1.08□□□□□ -2.24
SWI5YDR146C ATG17Q06410 417 aa1.08□□□□□ -2.24
SWI5YDR146C EMC6Q12431 108 aa1.08□□□□□ -2.24
SWI5YDR146C YBL008W-AQ3E821 79 aa1.08□□□□□ -2.24
SWI5YDR146C BEM2P39960 2167 aaKnown RBP1.08□□□□□ -2.24
SWI5YDR146C YKR104WP0CE69 306 aa1.07□□□□□ -2.24
SWI5YDR146C CCA1P21269 546 aa1.07□□□□□ -2.24
SWI5YDR146C YKL075CP36083 450 aa1.07□□□□□ -2.24
SWI5YDR146C CTR2P38865 189 aa1.07□□□□□ -2.24
SWI5YDR146C ASI3P53983 676 aa1.07□□□□□ -2.24
SWI5YDR146C SYC1Q08553 188 aaPredicted RBP1.07□□□□□ -2.24
SWI5YDR146C PST1Q12355 444 aa1.07□□□□□ -2.24
SWI5YDR146C YPL229WQ99395 206 aa1.07□□□□□ -2.24
SWI5YDR146C COX5AP00424 153 aa1.07□□□□□ -2.24
SWI5YDR146C YCR102CP25608 368 aa1.07□□□□□ -2.24
SWI5YDR146C SCM4P32564 187 aa1.07□□□□□ -2.24
SWI5YDR146C YOR062CP36025 268 aa1.07□□□□□ -2.24
SWI5YDR146C SNZ3P43545 298 aa1.07□□□□□ -2.24
SWI5YDR146C OST2P46964 130 aa1.07□□□□□ -2.24
SWI5YDR146C SPG4Q04438 115 aa1.07□□□□□ -2.24
SWI5YDR146C YDR124WQ04608 324 aa1.07□□□□□ -2.24
SWI5YDR146C TY3A-GQ12173 290 aa1.07□□□□□ -2.24
SWI5YDR146C MSH5Q12175 901 aa1.07□□□□□ -2.24
SWI5YDR146C ATG31Q12421 196 aa1.07□□□□□ -2.24
SWI5YDR146C TY3A-IQ99219 290 aa1.07□□□□□ -2.24
SWI5YDR146C SAS5Q99314 248 aa1.07□□□□□ -2.24
SWI5YDR146C SWI1P09547 1314 aa1.06□□□□□ -2.24
SWI5YDR146C MRP1P10662 321 aaKnown RBP1.06□□□□□ -2.24
SWI5YDR146C RNA15P25299 296 aaPredicted RBP1.06□□□□□ -2.24
SWI5YDR146C YHB1P39676 399 aaKnown RBP1.06□□□□□ -2.24
SWI5YDR146C YER189WP40104 122 aa1.06□□□□□ -2.24
SWI5YDR146C YJL027CP47063 138 aaPredicted RBP1.06□□□□□ -2.24
SWI5YDR146C YNL046WP53956 172 aa1.06□□□□□ -2.24
SWI5YDR146C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
SWI5YDR146C YPR098CQ06089 161 aa1.06□□□□□ -2.24
SWI5YDR146C YPR147CQ06522 304 aaKnown RBP1.06□□□□□ -2.24
SWI5YDR146C YOR186WQ08560 144 aa1.06□□□□□ -2.24
SWI5YDR146C YLR462WO13556 202 aa1.06□□□□□ -2.24
SWI5YDR146C Q0255P03881 472 aa1.06□□□□□ -2.24
SWI5YDR146C RPO26P20435 155 aa1.06□□□□□ -2.24
SWI5YDR146C YUH1P35127 236 aa1.06□□□□□ -2.24
SWI5YDR146C RCN1P36054 211 aa1.06□□□□□ -2.24
SWI5YDR146C NRG2P38082 220 aa1.06□□□□□ -2.24
SWI5YDR146C YEL075CP39972 122 aa1.06□□□□□ -2.24
SWI5YDR146C HOC1P47124 396 aa1.06□□□□□ -2.24
SWI5YDR146C USE1P53146 245 aa1.06□□□□□ -2.24
SWI5YDR146C SRL4Q03085 281 aa1.06□□□□□ -2.24
SWI5YDR146C YLR173WQ06247 608 aa1.06□□□□□ -2.24
SWI5YDR146C RRP40Q08285 240 aaKnown RBP1.06□□□□□ -2.24
SWI5YDR146C YOR029WQ12243 111 aa1.06□□□□□ -2.24
SWI5YDR146C ERD2P18414 219 aa1.05□□□□□ -2.24
SWI5YDR146C DOG1P38774 246 aa1.05□□□□□ -2.24
SWI5YDR146C SNX4P47057 423 aa1.05□□□□□ -2.24
SWI5YDR146C YJR079WP47126 109 aa1.05□□□□□ -2.24
SWI5YDR146C SNZ2P53824 298 aa1.05□□□□□ -2.24
SWI5YDR146C YNL134CP53912 376 aaKnown RBP1.05□□□□□ -2.24
SWI5YDR146C GOT1Q03554 138 aa1.05□□□□□ -2.24
SWI5YDR146C FAR8Q05040 523 aa1.05□□□□□ -2.24
SWI5YDR146C YLR179CQ06252 201 aaKnown RBP1.05□□□□□ -2.24
SWI5YDR146C YLR030WQ07967 263 aa1.05□□□□□ -2.24
SWI5YDR146C SLD7Q08457 257 aa1.05□□□□□ -2.24
SWI5YDR146C YCT1Q12235 531 aa1.05□□□□□ -2.24
SWI5YDR146C YOL107WQ12239 342 aa1.05□□□□□ -2.24
SWI5YDR146C TCP1P12612 559 aaKnown RBP1.04□□□□□ -2.24
SWI5YDR146C YGP1P38616 354 aaKnown RBP1.04□□□□□ -2.24
SWI5YDR146C COS8P38723 381 aa1.04□□□□□ -2.24
SWI5YDR146C BFR1P38934 470 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24 RIP-Chip
SWI5YDR146C YGL159WP53110 370 aa1.04□□□□□ -2.24
SWI5YDR146C YDR209CQ03480 137 aa1.04□□□□□ -2.24
SWI5YDR146C SEI1Q06058 285 aa1.04□□□□□ -2.24
SWI5YDR146C YPR172WQ06608 200 aa1.04□□□□□ -2.24
SWI5YDR146C BTS1Q12051 335 aa1.04□□□□□ -2.24
SWI5YDR146C SIR4P11978 1358 aa1.04□□□□□ -2.24
SWI5YDR146C RPS5P26783 225 aaKnown RBP1.04□□□□□ -2.24
SWI5YDR146C MSA2P36157 363 aa1.04□□□□□ -2.24
SWI5YDR146C FZO1P38297 855 aa1.04□□□□□ -2.24
SWI5YDR146C ARC15P40518 154 aaRIP-Chip data1.04□□□□□ -2.24not detected
SWI5YDR146C RPA43P46669 326 aa1.04□□□□□ -2.24
SWI5YDR146C DAD3P69850 94 aa1.04□□□□□ -2.24
SWI5YDR146C BBP1Q12365 385 aa1.04□□□□□ -2.24
SWI5YDR146C SSH1P38353 490 aaKnown RBP1.03□□□□□ -2.24
SWI5YDR146C YHR125WP38831 101 aa1.03□□□□□ -2.24
SWI5YDR146C BNA6P43619 295 aa1.03□□□□□ -2.24
SWI5YDR146C YJR149WP47177 404 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms