RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W YDR249CQ03787 373 aa5.06□□□□□ -1.6
VMS1YDR049W TAZ1Q06510 381 aa5.06□□□□□ -1.6
VMS1YDR049W YLR030WQ07967 263 aa5.06□□□□□ -1.6
VMS1YDR049W IRC13Q08630 104 aa5.06□□□□□ -1.6
VMS1YDR049W AHA1Q12449 350 aaKnown RBP5.06□□□□□ -1.6
VMS1YDR049W PEX11Q12462 236 aa5.06□□□□□ -1.6
VMS1YDR049W MET5P47169 1442 aa5.06□□□□□ -1.6
VMS1YDR049W ARO1P08566 1588 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W BUD3P25558 1636 aa5.05□□□□□ -1.6
VMS1YDR049W SAL1D6W196 494 aa5.05□□□□□ -1.6
VMS1YDR049W MRS1P07266 363 aa5.05□□□□□ -1.6
VMS1YDR049W CDC6P09119 513 aa5.05□□□□□ -1.6
VMS1YDR049W MRPL9P31334 269 aa5.05□□□□□ -1.6
VMS1YDR049W ARC40P38328 384 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W POP4P38336 279 aa5.05□□□□□ -1.6
VMS1YDR049W LAG1P38703 411 aa5.05□□□□□ -1.6
VMS1YDR049W ECM14P38836 430 aa5.05□□□□□ -1.6
VMS1YDR049W MDM31P38880 579 aa5.05□□□□□ -1.6
VMS1YDR049W LSM4P40070 187 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W YMR144WP40214 342 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W PSA1P41940 361 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W YPL014WQ02606 381 aa5.05□□□□□ -1.6
VMS1YDR049W ROT1Q03691 256 aa5.05□□□□□ -1.6
VMS1YDR049W SDH7Q04401 133 aa5.05□□□□□ -1.6
VMS1YDR049W ERV2Q12284 196 aa5.05□□□□□ -1.6
VMS1YDR049W IGO2Q9P305 131 aa5.05□□□□□ -1.6
VMS1YDR049W TY3B-IQ7LHG5 1498 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W SAM2P19358 384 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W RPS1BP23248 255 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W LSB5P25369 354 aa5.05□□□□□ -1.6
VMS1YDR049W UGX2P32772 223 aa5.05□□□□□ -1.6
VMS1YDR049W GPX2P38143 162 aa5.05□□□□□ -1.6
VMS1YDR049W GLE2P40066 365 aa5.05□□□□□ -1.6
VMS1YDR049W YIL060WP40519 144 aa5.05□□□□□ -1.6
VMS1YDR049W WWM1P43582 211 aaKnown RBP5.05□□□□□ -1.6
VMS1YDR049W YIP1P53039 248 aa5.05□□□□□ -1.6
VMS1YDR049W RHO4Q00246 291 aa5.05□□□□□ -1.6
VMS1YDR049W YDR476CQ03362 224 aa5.05□□□□□ -1.6
VMS1YDR049W YLR046CQ12253 270 aa5.05□□□□□ -1.6
VMS1YDR049W YKL068W-AQ3E826 78 aa5.05□□□□□ -1.6
VMS1YDR049W MRPS28P21771 286 aa5.04□□□□□ -1.6
VMS1YDR049W RNA14P25298 677 aaKnown RBP5.04□□□□□ -1.6
VMS1YDR049W HIS7P33734 552 aaKnown RBP5.04□□□□□ -1.6
VMS1YDR049W SRY1P36007 326 aa5.04□□□□□ -1.6
VMS1YDR049W RCK1P38622 512 aa5.04□□□□□ -1.6
VMS1YDR049W YHK8P38776 514 aa5.04□□□□□ -1.6
VMS1YDR049W MST28P39552 234 aa5.04□□□□□ -1.6
VMS1YDR049W YIL029CP40538 142 aa5.04□□□□□ -1.6
VMS1YDR049W GLC8P41818 229 aa5.04□□□□□ -1.6
VMS1YDR049W YPS5P53057 165 aa5.04□□□□□ -1.6
VMS1YDR049W VHT1P53241 593 aa5.04□□□□□ -1.6
VMS1YDR049W FRE4P53746 719 aa5.04□□□□□ -1.6
VMS1YDR049W HCH1P53834 153 aa5.04□□□□□ -1.6
VMS1YDR049W IMP4P53941 290 aaKnown RBP5.04□□□□□ -1.6
VMS1YDR049W HSK3P69852 69 aa5.04□□□□□ -1.6
VMS1YDR049W GCN3P14741 305 aa5.03□□□□□ -1.6
VMS1YDR049W YCR006CP25350 157 aa5.03□□□□□ -1.6
VMS1YDR049W YBL010CP32788 280 aa5.03□□□□□ -1.6
VMS1YDR049W FRE2P36033 711 aa5.03□□□□□ -1.6
VMS1YDR049W GEP4P38812 185 aa5.03□□□□□ -1.6
VMS1YDR049W YHR127WP38833 243 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W PGD1P40356 397 aa5.03□□□□□ -1.6
VMS1YDR049W TOS8P53147 276 aa5.03□□□□□ -1.6
VMS1YDR049W SWS2P53937 143 aa5.03□□□□□ -1.6
VMS1YDR049W YMR010WQ03687 405 aa5.03□□□□□ -1.6
VMS1YDR049W RAV2Q03956 351 aa5.03□□□□□ -1.6
VMS1YDR049W PRP11Q07350 266 aaPredicted RBP5.03□□□□□ -1.6
VMS1YDR049W COQ10Q08058 207 aa5.03□□□□□ -1.6
VMS1YDR049W YIR021W-AQ3E739 70 aa5.03□□□□□ -1.6
VMS1YDR049W NUP157P40064 1391 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W PDR12Q02785 1511 aa5.03□□□□□ -1.6
VMS1YDR049W POM152P39685 1337 aa5.03□□□□□ -1.6
VMS1YDR049W PRE7P23724 241 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W SCO1P23833 295 aa5.03□□□□□ -1.6
VMS1YDR049W RDL2Q08742 149 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W LPX1Q12405 387 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W YDL085C-AQ3E7B7 68 aaKnown RBP5.03□□□□□ -1.6
VMS1YDR049W EDE1P34216 1381 aa5.02□□□□□ -1.61
VMS1YDR049W COX5AP00424 153 aa5.02□□□□□ -1.61
VMS1YDR049W REP1P03871 373 aa5.02□□□□□ -1.61
VMS1YDR049W OAC1P32332 324 aa5.02□□□□□ -1.61
VMS1YDR049W YCR041WP37265 110 aa5.02□□□□□ -1.61
VMS1YDR049W YBR285WP38354 144 aa5.02□□□□□ -1.61
VMS1YDR049W EGT2P42835 1041 aa5.02□□□□□ -1.61
VMS1YDR049W FAR7P43592 221 aa5.02□□□□□ -1.61
VMS1YDR049W IKS1P47042 667 aa5.02□□□□□ -1.61
VMS1YDR049W SAE3P89114 91 aa5.02□□□□□ -1.61
VMS1YDR049W BET5Q03630 159 aa5.02□□□□□ -1.61
VMS1YDR049W YDR278CQ05612 105 aa5.02□□□□□ -1.61
VMS1YDR049W SEI1Q06058 285 aa5.02□□□□□ -1.61
VMS1YDR049W YPL257WQ08974 193 aa5.02□□□□□ -1.61
VMS1YDR049W TRM10Q12400 293 aa5.02□□□□□ -1.61
VMS1YDR049W MHT1Q12525 324 aa5.02□□□□□ -1.61
VMS1YDR049W PHD1P36093 366 aa5.01□□□□□ -1.61
VMS1YDR049W MRPL24P36525 258 aaPredicted RBP5.01□□□□□ -1.61
VMS1YDR049W YIL067CP40514 678 aa5.01□□□□□ -1.61
VMS1YDR049W DFG10P40526 253 aa5.01□□□□□ -1.61
VMS1YDR049W YFL064CP43540 174 aa5.01□□□□□ -1.61
VMS1YDR049W BXI1P48558 297 aa5.01□□□□□ -1.61
VMS1YDR049W COQ5P49017 307 aa5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms