RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W MRPL51Q06090 140 aaPredicted RBP5.71□□□□□ -1.5
SLX5YDL013W GEP5Q12393 293 aa5.71□□□□□ -1.5
SLX5YDL013W EXO70P19658 623 aa5.7□□□□□ -1.5
SLX5YDL013W RAD23P32628 398 aaKnown RBP5.7□□□□□ -1.5
SLX5YDL013W TIR2P33890 251 aa5.7□□□□□ -1.5
SLX5YDL013W FRE2P36033 711 aa5.7□□□□□ -1.5
SLX5YDL013W VID24P38263 362 aa5.7□□□□□ -1.5
SLX5YDL013W LAG1P38703 411 aa5.7□□□□□ -1.5
SLX5YDL013W RRP4P38792 359 aaKnown RBP5.7□□□□□ -1.5
SLX5YDL013W NSG1P38837 291 aa5.7□□□□□ -1.5
SLX5YDL013W YAL037WP39728 267 aa5.7□□□□□ -1.5
SLX5YDL013W YFL064CP43540 174 aa5.7□□□□□ -1.5
SLX5YDL013W BST1P43571 1029 aa5.7□□□□□ -1.5
SLX5YDL013W PTR3P43606 678 aa5.7□□□□□ -1.5
SLX5YDL013W EXG2P52911 562 aa5.7□□□□□ -1.5
SLX5YDL013W MGA1P53050 456 aa5.7□□□□□ -1.5
SLX5YDL013W JAC1P53193 184 aa5.7□□□□□ -1.5
SLX5YDL013W YGR151CP53287 111 aa5.7□□□□□ -1.5
SLX5YDL013W SUE1Q06524 206 aa5.7□□□□□ -1.5
SLX5YDL013W RDI1Q12434 202 aa5.7□□□□□ -1.5
SLX5YDL013W HRP1Q99383 534 aaKnown RBP5.7□□□□□ -1.5
SLX5YDL013W TPK2P06245 380 aa5.69□□□□□ -1.5
SLX5YDL013W CTA1P15202 515 aa5.69□□□□□ -1.5
SLX5YDL013W DAL82P21705 255 aa5.69□□□□□ -1.5
SLX5YDL013W FRE1P32791 686 aa5.69□□□□□ -1.5
SLX5YDL013W APL3P38065 1025 aa5.69□□□□□ -1.5
SLX5YDL013W YHR210CP38893 341 aa5.69□□□□□ -1.5
SLX5YDL013W YER189WP40104 122 aa5.69□□□□□ -1.5
SLX5YDL013W URM1P40554 99 aaPredicted RBP5.69□□□□□ -1.5
SLX5YDL013W IRC8P47046 822 aa5.69□□□□□ -1.5
SLX5YDL013W ROT1Q03691 256 aa5.69□□□□□ -1.5
SLX5YDL013W TRM12Q04235 462 aa5.69□□□□□ -1.5
SLX5YDL013W HSP31Q04432 237 aa5.69□□□□□ -1.5
SLX5YDL013W SHS1Q07657 551 aa5.69□□□□□ -1.5
SLX5YDL013W MDM32Q12171 622 aa5.69□□□□□ -1.5
SLX5YDL013W IZH4Q99393 312 aa5.69□□□□□ -1.5
SLX5YDL013W ROT2P38138 954 aa5.68□□□□□ -1.5
SLX5YDL013W YBR285WP38354 144 aa5.68□□□□□ -1.5
SLX5YDL013W DOG1P38774 246 aa5.68□□□□□ -1.5
SLX5YDL013W PTI1P39927 425 aaPredicted RBP5.68□□□□□ -1.5
SLX5YDL013W FKH2P41813 862 aa5.68□□□□□ -1.5
SLX5YDL013W MDM34P53083 459 aa5.68□□□□□ -1.5
SLX5YDL013W LST7P53237 242 aa5.68□□□□□ -1.5
SLX5YDL013W SEC13Q04491 297 aaKnown RBP5.68□□□□□ -1.5
SLX5YDL013W YTH1Q06102 208 aaPredicted RBP5.68□□□□□ -1.5
SLX5YDL013W IRC13Q08630 104 aa5.68□□□□□ -1.5
SLX5YDL013W PCC1Q3E833 88 aa5.68□□□□□ -1.5
SLX5YDL013W HAP3P13434 144 aa5.68□□□□□ -1.5
SLX5YDL013W BUB3P26449 341 aa5.68□□□□□ -1.5
SLX5YDL013W YKR073CP36153 106 aa5.68□□□□□ -1.5
SLX5YDL013W YBL029WP38201 376 aa5.68□□□□□ -1.5
SLX5YDL013W VBA2P38358 474 aaKnown RBP5.68□□□□□ -1.5
SLX5YDL013W NIF3P53081 288 aa5.68□□□□□ -1.5
SLX5YDL013W POP6P53218 158 aa5.68□□□□□ -1.5
SLX5YDL013W ASI3P53983 676 aa5.68□□□□□ -1.5
SLX5YDL013W IZH1Q03419 316 aa5.68□□□□□ -1.5
SLX5YDL013W YDL177CQ12257 170 aa5.68□□□□□ -1.5
SLX5YDL013W YDL199CQ12407 687 aa5.68□□□□□ -1.5
SLX5YDL013W CAR1P00812 333 aaKnown RBP5.67□□□□□ -1.5
SLX5YDL013W ADK1P07170 222 aaKnown RBP5.67□□□□□ -1.5
SLX5YDL013W LSB5P25369 354 aa5.67□□□□□ -1.5
SLX5YDL013W SGE1P33335 543 aa5.67□□□□□ -1.5
SLX5YDL013W PAD1P33751 242 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SLX5YDL013W MMS21P38632 267 aa5.67□□□□□ -1.5
SLX5YDL013W YHR033WP38690 423 aa5.67□□□□□ -1.5
SLX5YDL013W YHL044WP38727 235 aa5.67□□□□□ -1.5
SLX5YDL013W PHO90P39535 881 aa5.67□□□□□ -1.5
SLX5YDL013W PAN6P40459 309 aa5.67□□□□□ -1.5
SLX5YDL013W MPA43P53583 542 aaPredicted RBP5.67□□□□□ -1.5
SLX5YDL013W DIC1Q06143 298 aa5.67□□□□□ -1.5
SLX5YDL013W MCH1Q07376 486 aa5.67□□□□□ -1.5
SLX5YDL013W HIP1P06775 603 aa5.66□□□□□ -1.5
SLX5YDL013W CDC6P09119 513 aa5.66□□□□□ -1.5
SLX5YDL013W SPT15P13393 240 aaKnown RBP5.66□□□□□ -1.5
SLX5YDL013W CAP2P13517 287 aa5.66□□□□□ -1.5
SLX5YDL013W CDC26P14724 124 aa5.66□□□□□ -1.5
SLX5YDL013W EPT1P22140 391 aa5.66□□□□□ -1.5
SLX5YDL013W PUT3P25502 979 aaPredicted RBP5.66□□□□□ -1.5
SLX5YDL013W DCG1P32460 244 aa5.66□□□□□ -1.5
SLX5YDL013W YET1P35723 206 aa5.66□□□□□ -1.5
SLX5YDL013W MRPL36P36531 177 aa5.66□□□□□ -1.5
SLX5YDL013W FRM2P37261 193 aa5.66□□□□□ -1.5
SLX5YDL013W YBR053CP38235 358 aa5.66□□□□□ -1.5
SLX5YDL013W PRE6P40303 254 aaKnown RBP5.66□□□□□ -1.5
SLX5YDL013W IBD2P53892 351 aa5.66□□□□□ -1.5
SLX5YDL013W UPS3Q04006 179 aa5.66□□□□□ -1.5
SLX5YDL013W ENT4Q07872 247 aa5.66□□□□□ -1.5
SLX5YDL013W RAD28Q12021 506 aa5.66□□□□□ -1.5
SLX5YDL013W YCT1Q12235 531 aa5.66□□□□□ -1.5
SLX5YDL013W PST1Q12355 444 aa5.66□□□□□ -1.5
SLX5YDL013W CSR2Q12734 1121 aa5.66□□□□□ -1.5
SLX5YDL013W UBA3Q99344 299 aa5.66□□□□□ -1.5
SLX5YDL013W YLR462WO13556 202 aa5.66□□□□□ -1.5
SLX5YDL013W MES1P00958 751 aaKnown RBP5.66□□□□□ -1.5
SLX5YDL013W TIR1P10863 254 aa5.66□□□□□ -1.5
SLX5YDL013W PDE1P22434 369 aa5.66□□□□□ -1.5
SLX5YDL013W INO2P26798 304 aa5.66□□□□□ -1.5
SLX5YDL013W PDC2P32896 925 aa5.66□□□□□ -1.5
SLX5YDL013W PDX3P38075 228 aaKnown RBP5.66□□□□□ -1.5
SLX5YDL013W MTC4P38335 694 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms