RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MSB2P32334 1306 aa6.47□□□□□ -1.37
TOD6YBL054W SPS4P09937 338 aa6.47□□□□□ -1.37
TOD6YBL054W SLZ1P40167 298 aa6.47□□□□□ -1.37
TOD6YBL054W MOB2P43563 287 aa6.47□□□□□ -1.37
TOD6YBL054W IKS1P47042 667 aa6.47□□□□□ -1.37
TOD6YBL054W BNS1P50084 137 aa6.47□□□□□ -1.37
TOD6YBL054W ACS2P52910 683 aaKnown RBP6.47□□□□□ -1.37
TOD6YBL054W YIP4P53093 235 aa6.47□□□□□ -1.37
TOD6YBL054W YAP1802P53309 568 aa6.47□□□□□ -1.37
TOD6YBL054W TEX1P53851 422 aaKnown RBP6.47□□□□□ -1.37
TOD6YBL054W GMC1Q04399 608 aa6.47□□□□□ -1.37
TOD6YBL054W YNR034W-AQ3E841 98 aa6.47□□□□□ -1.37
TOD6YBL054W SCEIP03882 235 aa6.46□□□□□ -1.38
TOD6YBL054W RIP1P08067 215 aa6.46□□□□□ -1.38
TOD6YBL054W MATALPHA1P0CY06 175 aa6.46□□□□□ -1.38
TOD6YBL054W HMLALPHA1P0CY07 175 aa6.46□□□□□ -1.38
TOD6YBL054W PET18P25362 215 aa6.46□□□□□ -1.38
TOD6YBL054W MDH3P32419 343 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
TOD6YBL054W MTC7P32633 139 aa6.46□□□□□ -1.38
TOD6YBL054W TIM12P32830 109 aa6.46□□□□□ -1.38
TOD6YBL054W MRPS9P38120 278 aa6.46□□□□□ -1.38
TOD6YBL054W FAT1P38225 669 aa6.46□□□□□ -1.38
TOD6YBL054W TRS20P38334 175 aa6.46□□□□□ -1.38
TOD6YBL054W VBA2P38358 474 aaKnown RBP6.46□□□□□ -1.38
TOD6YBL054W RRP3P38712 501 aaKnown RBP6.46□□□□□ -1.38
TOD6YBL054W YEA6P39953 335 aa6.46□□□□□ -1.38
TOD6YBL054W NIT3P49954 291 aa6.46□□□□□ -1.38
TOD6YBL054W YGR035CP53222 116 aa6.46□□□□□ -1.38
TOD6YBL054W VPS62P53285 467 aa6.46□□□□□ -1.38
TOD6YBL054W PDR16P53860 351 aaKnown RBP6.46□□□□□ -1.38
TOD6YBL054W YDR248CQ03786 193 aa6.46□□□□□ -1.38
TOD6YBL054W HNT1Q04344 158 aaKnown RBP6.46□□□□□ -1.38
TOD6YBL054W RTT103Q05543 409 aa6.46□□□□□ -1.38
TOD6YBL054W CTR3Q06686 241 aa6.46□□□□□ -1.38
TOD6YBL054W SRO7Q12038 1033 aa6.46□□□□□ -1.38
TOD6YBL054W YOR114WQ12219 294 aa6.46□□□□□ -1.38
TOD6YBL054W FYV7Q12247 151 aa6.46□□□□□ -1.38
TOD6YBL054W SRF1Q12516 437 aa6.46□□□□□ -1.38
TOD6YBL054W YPR014CQ6B0W2 109 aa6.46□□□□□ -1.38
TOD6YBL054W MPD2Q99316 277 aa6.46□□□□□ -1.38
TOD6YBL054W SLY41P22215 453 aa6.45□□□□□ -1.38
TOD6YBL054W PRO1P32264 428 aa6.45□□□□□ -1.38
TOD6YBL054W ERG1P32476 496 aaKnown RBP6.45□□□□□ -1.38
TOD6YBL054W MRPL11P36521 249 aaPredicted RBP6.45□□□□□ -1.38
TOD6YBL054W NEM1P38757 446 aa6.45□□□□□ -1.38
TOD6YBL054W PTC7P38797 343 aa6.45□□□□□ -1.38
TOD6YBL054W HEM14P40012 539 aa6.45□□□□□ -1.38
TOD6YBL054W RRD1P40454 393 aaKnown RBP6.45□□□□□ -1.38
TOD6YBL054W SEH1P53011 349 aaKnown RBP6.45□□□□□ -1.38
TOD6YBL054W YGL262WP53054 175 aa6.45□□□□□ -1.38
TOD6YBL054W VEL1P53058 206 aa6.45□□□□□ -1.38
TOD6YBL054W SLX9P53251 210 aaPredicted RBP6.45□□□□□ -1.38
TOD6YBL054W SCW4P53334 386 aaKnown RBP6.45□□□□□ -1.38
TOD6YBL054W OGG1P53397 376 aaPredicted RBP6.45□□□□□ -1.38
TOD6YBL054W YDC1Q02896 317 aa6.45□□□□□ -1.38
TOD6YBL054W NRG1Q03125 231 aa6.45□□□□□ -1.38
TOD6YBL054W NDE2Q07500 545 aa6.45□□□□□ -1.38
TOD6YBL054W YOR015WQ12169 119 aa6.45□□□□□ -1.38
TOD6YBL054W MMP1Q12372 583 aa6.45□□□□□ -1.38
TOD6YBL054W NPR1P22211 790 aa6.44□□□□□ -1.38
TOD6YBL054W EHD3P28817 500 aa6.44□□□□□ -1.38
TOD6YBL054W SSH4P32343 579 aa6.44□□□□□ -1.38
TOD6YBL054W ISF1P32488 338 aa6.44□□□□□ -1.38
TOD6YBL054W SPT23P35210 1082 aa6.44□□□□□ -1.38
TOD6YBL054W YOR062CP36025 268 aa6.44□□□□□ -1.38
TOD6YBL054W ARC40P38328 384 aaKnown RBP6.44□□□□□ -1.38
TOD6YBL054W RPP1P38786 293 aa6.44□□□□□ -1.38
TOD6YBL054W CHS7P38843 316 aa6.44□□□□□ -1.38
TOD6YBL054W ASK10P48361 1146 aa6.44□□□□□ -1.38
TOD6YBL054W DPB4Q04603 196 aaKnown RBP6.44□□□□□ -1.38
TOD6YBL054W CST9Q06032 482 aa6.44□□□□□ -1.38
TOD6YBL054W ISR1Q06098 443 aaKnown RBP6.44□□□□□ -1.38
TOD6YBL054W VAM3Q12241 283 aa6.44□□□□□ -1.38
TOD6YBL054W AGC1Q12482 902 aa6.44□□□□□ -1.38
TOD6YBL054W MET3P08536 511 aa6.44□□□□□ -1.38
TOD6YBL054W PAU19P0CE85 124 aa6.44□□□□□ -1.38
TOD6YBL054W PAU21P0CE86 164 aa6.44□□□□□ -1.38
TOD6YBL054W PAU22P0CE87 164 aa6.44□□□□□ -1.38
TOD6YBL054W CKA1P15790 372 aa6.44□□□□□ -1.38
TOD6YBL054W PAU3P25610 124 aa6.44□□□□□ -1.38
TOD6YBL054W ERG3P32353 365 aa6.44□□□□□ -1.38
TOD6YBL054W NRP1P32770 719 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
TOD6YBL054W SLC1P33333 303 aa6.44□□□□□ -1.38
TOD6YBL054W SEF1P34228 1148 aa6.44□□□□□ -1.38
TOD6YBL054W UIP3P39547 235 aa6.44□□□□□ -1.38
TOD6YBL054W YEA4P40004 342 aa6.44□□□□□ -1.38
TOD6YBL054W AIR1P40507 360 aaKnown RBP6.44□□□□□ -1.38
TOD6YBL054W OST3P48439 350 aa6.44□□□□□ -1.38
TOD6YBL054W TGL2P54857 326 aa6.44□□□□□ -1.38
TOD6YBL054W INP1Q03694 420 aa6.44□□□□□ -1.38
TOD6YBL054W RPC11Q04307 110 aaPredicted RBP6.44□□□□□ -1.38
TOD6YBL054W ASM4Q05166 528 aa6.44□□□□□ -1.38
TOD6YBL054W MRX8Q05473 314 aa6.44□□□□□ -1.38
TOD6YBL054W TDA6Q06466 467 aa6.44□□□□□ -1.38
TOD6YBL054W YPL272CQ08984 517 aa6.44□□□□□ -1.38
TOD6YBL054W YCT1Q12235 531 aa6.44□□□□□ -1.38
TOD6YBL054W SGA1P08019 549 aa6.43□□□□□ -1.38
TOD6YBL054W SAC7P17121 654 aa6.43□□□□□ -1.38
TOD6YBL054W CPR2P23285 205 aa6.43□□□□□ -1.38
TOD6YBL054W ELF1P36053 145 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms