RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 NUP85Q9BW27 656 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 ZBTB39O15060 712 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 ABCB1P08183 1280 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 HPGDP15428 266 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 VAC14Q08AM6 782 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 USP39Q53GS9 565 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 NLRP14Q86W24 1093 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 SH3RF3Q8TEJ3 882 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 ATP6V0A4Q9HBG4 840 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 PCDHB7Q9Y5E2 793 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 PEX1O43933 1283 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 PAGE5Q96GU1 130 aa17.25■□□□□ 0.35
CACNA1A-238ENST00000637276 ZNF302Q9NR11 478 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 BFSP2Q13515 415 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 CBFBQ13951 182 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 SATB2Q9UPW6 733 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 POU1F1P28069 291 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 DDX50Q9BQ39 737 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 KIAA0586Q9BVV6 1533 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 NMT2O60551 498 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 FGFR4P22455 802 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 ROR1Q01973 937 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 CNOT8Q9UFF9 292 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 CHURC1-FNTBB4DL54 471 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 ERVK-10P10266 1014 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 TCEA1P23193 301 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 TRIM71Q2Q1W2 868 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 CYLDQ9NQC7 956 aa17.24■□□□□ 0.35
CACNA1A-238ENST00000637276 ADSLP30566 484 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 PDIK1LQ8N165 341 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ACSF2Q96CM8 615 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 GALNT8Q9NY28 637 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 LOC102724428A0A0B4J2F2 783 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 CYP2D6P10635 497 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 SIK1P57059 783 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 OOSP2Q86WS3 158 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 TUBGCP3Q96CW5 907 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 CNBD2Q96M20 576 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ADAMTS1Q9UHI8 967 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 IKBKBO14920 756 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ITGB6P18564 788 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 GNA15P30679 374 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 PTRHD1Q6GMV3 140 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 GABBR1Q9UBS5 961 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ZNF197O14709 1029 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ACADMP11310 421 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 CLCN6P51797 869 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 GALNTL6Q49A17 601 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ARF4P18085 180 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 HOXD10P28358 340 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 TRIM11Q96F44 468 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 POLR3FQ9H1D9 316 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 MFSD1Q9H3U5 465 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 JRKLQ9Y4A0 524 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 SLC30A5Q8TAD4 765 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 OSBPL1AQ9BXW6 950 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 STMN3Q9NZ72 180 aa17.23■□□□□ 0.35
CACNA1A-238ENST00000637276 ORC1Q13415 861 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 TBC1D19Q8N5T2 526 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 CD2BP2O95400 341 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 FGFR2P21802 821 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 ALDH9A1P49189 494 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 SRSF11Q05519 484 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 C11orf88Q6PI97 169 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 PHACTR4Q8IZ21 702 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 GAP43P17677 238 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 MAPK6Q16659 721 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 ASPRV1Q53RT3 343 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 HIST1H2AGP0C0S8 130 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 HIST1H2ADP20671 130 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 NBPF9Q3BBW0 867 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 PODNQ7Z5L7 613 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 HIST1H2AHQ96KK5 128 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 HIST1H2AJQ99878 128 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 H2AFJQ9BTM1 129 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 TDRKHQ9Y2W6 561 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 KIF28PB7ZC32 967 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 MAP3K6O95382 1288 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 CCNIQ14094 377 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 PBKQ96KB5 322 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 ASNSD1Q9NWL6 643 aa17.22■□□□□ 0.35
CACNA1A-238ENST00000637276 POTEMA6NI47 508 aa17.21■□□□□ 0.35
CACNA1A-238ENST00000637276 TNPO2O14787 897 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-238ENST00000637276 PDE8BO95263 885 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms