RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GLG1Q92896 1179 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 ELMO3Q96BJ8 720 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 FAM84AQ96KN4 292 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 ANKFY1Q9P2R3 1169 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 ALG6Q9Y672 507 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 LOC102724159A0A0B4J2E5 919 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 KRIT1O00522 736 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 NOP56O00567 594 aaKnown RBP21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 GAS2O43903 313 aaKnown RBP21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 HLA-DRAP01903 254 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 EFNA5P52803 228 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 NNTQ13423 1086 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 PWP2Q15269 919 aaKnown RBP21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 WDR44Q5JSH3 913 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 LDLRAD1Q5T700 205 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 MAP1SQ66K74 1059 aaPredicted RBP21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 CCDC62Q6P9F0 684 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 ZPBP2Q6X784 338 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 EXOC8Q8IYI6 725 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 AP1M1Q9BXS5 423 aa21.19■□□□□ 0.98
PCDHB11-202ENST00000624887 PTPRJQ12913 1337 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 ZSCAN5CA6NGD5 496 aaPredicted RBP21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 SYF2O95926 243 aaKnown RBP21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 CARSP49589 748 aaKnown RBP21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 PAK2Q13177 524 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 ZBTB41Q5SVQ8 909 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 DCAF12L1Q5VU92 463 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 ATP8B4Q8TF62 1192 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 TCP11Q8WWU5 503 aa21.18■□□□□ 0.98
PCDHB11-202ENST00000624887 IGKV6-21A0A0C4DH24 114 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ZBTB42B2RXF5 422 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 VNN1O95497 513 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CYP1A2P05177 515 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 KRT5P13647 590 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 MARK3P27448 753 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 GJA5P36382 358 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 PIK3CAP42336 1068 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ERVK-9P63128 1117 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 TRIM50Q86XT4 487 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 FBXO16Q8IX29 292 aaPredicted RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CGRRF1Q99675 332 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 VPS18Q9P253 973 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ADAM21Q9UKJ8 722 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 GTF3C4Q9UKN8 822 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 MCM3APO60318 1980 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CNTNAP2Q9UHC6 1331 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 MIF4GDA9UHW6 222 aaKnown RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 SART1O43290 800 aaKnown RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 SNAPC2Q13487 334 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 BIRC3Q13489 604 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 MXD4Q14582 209 aaPredicted RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CDCA2Q69YH5 1023 aaPredicted RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ZNF771Q7L3S4 317 aaPredicted RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 DHX37Q8IY37 1157 aaKnown RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 EIF1ADQ8N9N8 165 aaKnown RBP21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CASKIN2Q8WXE0 1202 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ZBTB9Q96C00 473 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 SPATA33Q96N06 139 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 RPS6KC1Q96S38 1066 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 CCDC113Q9H0I3 377 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 FAN1Q9Y2M0 1017 aa21.17■□□□□ 0.98
PCDHB11-202ENST00000624887 ESYT3A0FGR9 886 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 MSCO60682 206 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 MKRN4PQ13434 485 aaPredicted RBP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 WDR78Q5VTH9 848 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 ACAD10Q6JQN1 1059 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 SLITRK6Q9H5Y7 841 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 NFU1Q9UMS0 254 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 BHMG1C9JSJ3 638 aaPredicted RBP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 AGPSO00116 658 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 CLDN3O15551 220 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 FGGP02679 453 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 ITGA4P13612 1032 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 SLC26A2P50443 739 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 GYS2P54840 703 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 LAMTOR4Q0VGL1 99 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 PLCB4Q15147 1175 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 CLUL1Q15846 466 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 CLEC16AQ2KHT3 1053 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 ZNF677Q86XU0 584 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 IFT81Q8WYA0 676 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 ALG3Q92685 438 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 RNPC3Q96LT9 517 aaKnown RBP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 NAP1L3Q99457 506 aaPredicted RBP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 MRPL4Q9BYD3 311 aaKnown RBP21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 PLEKHA4Q9H4M7 779 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 RRAGCQ9HB90 399 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 UVRAGQ9P2Y5 699 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 PCDHB2Q9Y5E7 798 aa21.16■□□□□ 0.98
PCDHB11-202ENST00000624887 GOLGA6BA6NDN3 693 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 TOM1L1O75674 476 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 CLSTN1O94985 981 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 GGCXP38435 758 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 BPIFB4P59827 614 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 EXOC4Q96A65 974 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 ZNF653Q96CK0 615 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 NUP85Q9BW27 656 aa21.15■□□□□ 0.98
PCDHB11-202ENST00000624887 DDX47Q9H0S4 455 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms