RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ODF2LQ9ULJ1 636 aa19.67■□□□□ 0.74
CHMP2A-203ENST00000597209 VPS37CA5D8V6 355 aaPredicted RBP19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 SPDYE4A6NLX3 237 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 H0YCG3 227 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 MAPTP10636 758 aaKnown RBP19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 SCP2P22307 547 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 YARSP54577 528 aaKnown RBP19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 SIGLEC14Q08ET2 396 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 STRN3Q13033 797 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 ZNF568Q3ZCX4 644 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 LILRA6Q6PI73 481 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 DCLRE1AQ6PJP8 1040 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 MPZL3Q6UWV2 235 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 ZPBP2Q6X784 338 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 PIK3R5Q8WYR1 880 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 MFSD14AQ96MC6 490 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 TTPALQ9BTX7 342 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 CACNG4Q9UBN1 327 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 PLXNA3P51805 1871 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 DENND4AQ7Z401 1863 aa19.66■□□□□ 0.74
CHMP2A-203ENST00000597209 MYH11P35749 1972 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 SMIM28A0A1B0GU29 152 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 TOM1L1O75674 476 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 SYT1P21579 422 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 NCKAP1LP55160 1127 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 RAD51AP2Q09MP3 1159 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 RTP2Q5QGT7 225 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 HFE2Q6ZVN8 426 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 CEP120Q8N960 986 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 TDRD5Q8NAT2 981 aaKnown RBP19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 B3GALT6Q96L58 329 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 KCNH6Q9H252 994 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 TSHZ2Q9NRE2 1034 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 BLOC1S4Q9NUP1 217 aa19.65■□□□□ 0.74
CHMP2A-203ENST00000597209 TMEM221A6NGB7 291 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 M0R296 226 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 KCNE1P15382 129 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 GRIN1Q05586 938 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 PTPAQ15257 358 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 FAM171A1Q5VUB5 890 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 CCDC149Q6ZUS6 474 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 LNX1Q8TBB1 728 aaPredicted RBP19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 LRRC15Q8TF66 581 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 DDX27Q96GQ7 796 aaKnown RBP19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 SNX27Q96L92 541 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 TCHPQ9BT92 498 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 SLC38A7Q9NVC3 462 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 ZDHHC7Q9NXF8 308 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 MTCL1Q9Y4B5 1905 aaKnown RBP19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 TECTAO75443 2155 aa19.64■□□□□ 0.73
CHMP2A-203ENST00000597209 NPHP3-ACAD11A0A0J9YXS1 232 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 CCDC195A0A1B0GUA6 201 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 TGM5O43548 720 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 PLCG1P19174 1290 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 FGFR3P22607 806 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 SP100P23497 879 aaPredicted RBP19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 PLA2G5P39877 138 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 CLCNKBP51801 687 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 ZNF131P52739 623 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 RESTQ13127 1097 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 UPP1Q16831 310 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 GLRA4Q5JXX5 417 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 OTOP3Q7RTS5 596 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 ZBTB33Q86T24 672 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 GPBP1Q86WP2 473 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 PALB2Q86YC2 1186 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 FEZF2Q8TBJ5 459 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 HASPINQ8TF76 798 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 RAD54LQ92698 747 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 ACSF2Q96CM8 615 aaPredicted RBP19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 CLSTN3Q9BQT9 956 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 REEP2Q9BRK0 252 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 CNTN3Q9P232 1028 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 SORCS3Q9UPU3 1222 aa19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 MORC2Q9Y6X9 1032 aaPredicted RBP19.63■□□□□ 0.73
CHMP2A-203ENST00000597209 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 B3GAT3O94766 335 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 OSTNP61366 133 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 MCL1Q07820 350 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 NOLC1Q14978 699 aaKnown RBP eCLIP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 KARSQ15046 597 aaKnown RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 PSMD5Q16401 504 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 PRSS55Q6UWB4 352 aaPredicted RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 CD300LGQ6UXG3 332 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 HAUS6Q7Z4H7 955 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 CEP57Q86XR8 500 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 UBALD2Q8IYN6 164 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 FAM122AQ96E09 287 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 ZBTB45Q96K62 511 aaPredicted RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 WDR6Q9NNW5 1121 aaKnown RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 SRPRBQ9Y5M8 271 aaKnown RBP19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 TRIP11Q15643 1979 aa19.62■□□□□ 0.73
CHMP2A-203ENST00000597209 C2orf16Q68DN1 1984 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 TRAPPC3O43617 180 aa19.61■□□□□ 0.73
CHMP2A-203ENST00000597209 RPL17P18621 184 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms