RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CXCL14O95715 111 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 KCNE1P15382 129 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 MRPS5P82675 430 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 HSP90AA2PQ14568 343 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 FAM26FQ5R3K3 315 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 PLPP4Q5VZY2 271 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 TMEM173Q86WV6 379 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 CD302Q8IX05 232 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 MRPL43Q8N983 215 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 PABPC5Q96DU9 382 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 DDX27Q96GQ7 796 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 PPP1R10Q96QC0 940 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 IGFLR1Q9H665 355 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 RPF1Q9H9Y2 349 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 CNTN3Q9P232 1028 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 STYXL1Q9Y6J8 313 aa18.85■□□□□ 0.61
SHKBP1-212ENST00000596163 MYH11P35749 1972 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 CDH23Q9H251 3354 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 ANKRD63C9JTQ0 380 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 MYBP10242 640 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 CTSAP10619 480 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 CA8P35219 290 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 NRIP1P48552 1158 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 POU5F1Q01860 360 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 PPP2R3AQ06190 1150 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 HYAL1Q12794 435 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 CUL4BQ13620 913 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 DCLRE1AQ6PJP8 1040 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 EP400NLQ6ZTU2 488 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 POMGNT1Q8WZA1 660 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 ZBP1Q9H171 429 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 UBE2ZQ9H832 354 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 PRDM6Q9NQX0 595 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 AGO2Q9UKV8 859 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 IRAK3Q9Y616 596 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 TRANK1O15050 2925 aa18.84■□□□□ 0.61
SHKBP1-212ENST00000596163 CASTOR2A6NHX0 329 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 XPOTO43592 962 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 ZNF202O95125 648 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 LDHAP00338 332 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 SOD2P04179 222 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 SRGAP2BP0DMP2 458 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 ELAVL2Q12926 359 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 PSMD2Q13200 908 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 NAB2Q15742 525 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 SLC10A6Q3KNW5 377 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 SEZ6Q53EL9 994 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 GLRA4Q5JXX5 417 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 KIAA1841Q6NSI8 718 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 SLC39A4Q6P5W5 647 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 KRBA2Q6ZNG9 492 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 RBM23Q86U06 439 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 EFHBQ8N7U6 833 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 BCL7CQ8WUZ0 217 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 HERC2P3Q9BVR0 1158 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 HAPLN2Q9GZV7 340 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 EXOC1Q9NV70 894 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 MARCH5Q9NX47 278 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 CLDND1Q9NY35 253 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 ADAM28Q9UKQ2 775 aa18.83■□□□□ 0.6
SHKBP1-212ENST00000596163 UBE4BO95155 1302 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 KIAA1671Q9BY89 1806 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 C2orf71A6NGG8 1288 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 KIAA0391O15091 583 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 URODP06132 367 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 GARTP22102 1010 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 RPL9P32969 192 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 CASP5P51878 434 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 SNRPFP62306 86 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 ADAM15Q13444 863 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 COL19A1Q14993 1142 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 DUSP6Q16828 381 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 ADGRD2Q7Z7M1 963 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 GRAMD1CQ8IYS0 662 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 ZNF507Q8TCN5 953 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 EMILIN2Q9BXX0 1053 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 CXCL16Q9H2A7 254 aa18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 MRPL17Q9NRX2 175 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 CPSF3Q9UKF6 684 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-212ENST00000596163 SF3B1O75533 1304 aaKnown RBP eCLIP18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 TTC26A0AVF1 554 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 HIDE1A8MVS5 230 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 TRAPPC3O43617 180 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 CXCL8P10145 99 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 CASP1P29466 404 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 KCNA1Q09470 495 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 CTC1Q2NKJ3 1217 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 USP41Q3LFD5 358 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 PUS10Q3MIT2 529 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 FUT10Q6P4F1 479 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 GPR65Q8IYL9 337 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 ASB2Q96Q27 587 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 GOLPH3LQ9H4A5 285 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 ASB7Q9H672 318 aa18.81■□□□□ 0.6
SHKBP1-212ENST00000596163 PCDHGC5Q9Y5F6 944 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms