RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ALDH1A3P47895 512 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 RAP2BP61225 183 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 CDC42EP1Q00587 391 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 FOXE3Q13461 319 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 IL10RAQ13651 578 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 TOB2Q14106 344 aaPredicted RBP6.22□□□□□ -1.41
USP8-218ENST00000561330 CSRP2Q16527 193 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 ATXN7L2Q5T6C5 722 aaPredicted RBP6.22□□□□□ -1.41
USP8-218ENST00000561330 OTUD7BQ6GQQ9 843 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 PPP4R3AQ6IN85 833 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 ZGPATQ8N5A5 531 aaKnown RBP6.22□□□□□ -1.41
USP8-218ENST00000561330 RNF169Q8NCN4 708 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 FAM193BQ96PV7 902 aaPredicted RBP6.22□□□□□ -1.41
USP8-218ENST00000561330 NDC1Q9BTX1 674 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 CEP72Q9P209 647 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 IP6K2Q9UHH9 426 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 SORCS3Q9UPU3 1222 aa6.22□□□□□ -1.41
USP8-218ENST00000561330 MATN3O15232 486 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 SGTAO43765 313 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 RECQL4O94761 1208 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 C1SP09871 688 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 CT47B1P0C2W7 299 aaPredicted RBP6.21□□□□□ -1.42
USP8-218ENST00000561330 TNFRSF1AP19438 455 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 EPHB1P54762 984 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 MCL1Q07820 350 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 TARDBPQ13148 414 aaKnown RBP eCLIP6.21□□□□□ -1.42
USP8-218ENST00000561330 MTM1Q13496 603 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 RABL3Q5HYI8 236 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 ODR4Q5SWX8 454 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 GGNQ86UU5 652 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 CPT1CQ8TCG5 803 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 HSPBAP1Q96EW2 488 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 ZNF503Q96F45 646 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 TMX3Q96JJ7 454 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 VPS11Q9H270 941 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 TCF7L1Q9HCS4 588 aa6.21□□□□□ -1.42
USP8-218ENST00000561330 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.21□□□□□ -1.42
USP8-218ENST00000561330 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
USP8-218ENST00000561330 E2F8A0AVK6 867 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 TRIM24O15164 1050 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 FAM20BO75063 409 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
USP8-218ENST00000561330 VCAM1P19320 739 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 APOBEC3AP31941 199 aaPredicted RBP6.2□□□□□ -1.42
USP8-218ENST00000561330 DGCR2P98153 550 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 CREMQ03060 361 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 ATP2B3Q16720 1220 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 PLEKHG6Q3KR16 790 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 MIIPQ5JXC2 388 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 ZNF529Q6P280 563 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 SEM1Q6ZVN7 128 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 DRC7Q8IY82 874 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 CACTINQ8WUQ7 758 aaKnown RBP6.2□□□□□ -1.42
USP8-218ENST00000561330 KAT5Q92993 513 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 RAB24Q969Q5 203 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 DCLRE1CQ96SD1 692 aaKnown RBP6.2□□□□□ -1.42
USP8-218ENST00000561330 ZNF747Q9BV97 191 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 ZNF341Q9BYN7 854 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 ANKRD6Q9Y2G4 727 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 CFAP20Q9Y6A4 193 aaKnown RBP6.2□□□□□ -1.42
USP8-218ENST00000561330 PNPLA7Q6ZV29 1317 aa6.2□□□□□ -1.42
USP8-218ENST00000561330 GRXCR1A8MXD5 290 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 LEFTY2O00292 366 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 DTNBO60941 627 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 ABLIM3O94929 683 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 POMCP01189 267 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 S100BP04271 92 aaPredicted RBP6.19□□□□□ -1.42
USP8-218ENST00000561330 PF4V1P10720 104 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 RAB27AP51159 221 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 CTXN1P60606 82 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 NHLH2Q02577 135 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 PIN1Q13526 163 aaPredicted RBP6.19□□□□□ -1.42
USP8-218ENST00000561330 RAB39AQ14964 217 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 TTC7BQ86TV6 843 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 SYT12Q8IV01 421 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 CLPTM1LQ96KA5 538 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 PHACTR3Q96KR7 559 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 NUP88Q99567 741 aaPredicted RBP6.19□□□□□ -1.42
USP8-218ENST00000561330 MYOCQ99972 504 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 SLC23A1Q9UHI7 598 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 PCDHB1Q9Y5F3 818 aa6.19□□□□□ -1.42
USP8-218ENST00000561330 DRGXA6NNA5 263 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 AKAP10O43572 662 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 PDCP20941 246 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 AKAP5P24588 427 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 CHN2P52757 468 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 SLC25A3Q00325 362 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 UBXN2BQ14CS0 331 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 LSM12Q3MHD2 195 aaKnown RBP6.18□□□□□ -1.42
USP8-218ENST00000561330 TUBA3EQ6PEY2 450 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 GADL1Q6ZQY3 521 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 PLXDC1Q8IUK5 500 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 ZNF276Q8N554 614 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 IFI44Q8TCB0 444 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 C11orf54Q9H0W9 315 aaPredicted RBP6.18□□□□□ -1.42
USP8-218ENST00000561330 TRPM5Q9NZQ8 1165 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms