RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, human

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1-208	ENST00000526001	CLCNKB	P51801	687 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	FAM171A1	Q5VUB5	890 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	CD300LG	Q6UXG3	332 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	C15orf39	Q6ZRI6	1047 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	CCDC149	Q6ZUS6	474 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	BRAP	Q7Z569	592 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	BMP8A	Q7Z5Y6	402 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	ZDHHC14	Q8IZN3	488 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	TMEM161B	Q8NDZ6	487 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	CMAS	Q8NFW8	434 aa	Predicted RBP	13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	SPIRE2	Q8WWL2	714 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	PBXIP1	Q96AQ6	731 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	AK8	Q96MA6	479 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	MFSD14A	Q96MC6	490 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	NTPCR	Q9BSD7	190 aa	Known RBP	13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	TTPAL	Q9BTX7	342 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	CCDC94	Q9BW85	323 aa	Predicted RBP	13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	BACH2	Q9BYV9	841 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	RBM19	Q9Y4C8	960 aa	Known RBP	13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	TECTA	O75443	2155 aa		13.7	□□□□□ -0.22
CSF1-208	ENST00000526001	SMIM28	A0A1B0GU29	152 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	ADAM12	O43184	909 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	BRD1	O95696	1058 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	MAPT	P10636	758 aa	Known RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	SOX4	Q06945	474 aa	Predicted RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	DHX8	Q14562	1220 aa	Known RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	KARS	Q15046	597 aa	Known RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	SEZ6	Q53EL9	994 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	XKR4	Q5GH76	650 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	LILRA6	Q6PI73	481 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	MPZL3	Q6UWV2	235 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	ALKAL1	Q6UXT8	129 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	GPR65	Q8IYL9	337 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	KCTD17	Q8N5Z5	321 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	C3orf58	Q8NDZ4	430 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	LNX1	Q8TBB1	728 aa	Predicted RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	ZNF707	Q96C28	371 aa	Predicted RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	SNX27	Q96L92	541 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	ZMAT2	Q96NC0	199 aa	Known RBP	13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	CLSTN3	Q9BQT9	956 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	TCHP	Q9BT92	498 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	BLOC1S4	Q9NUP1	217 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	UST	Q9Y2C2	406 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	CLIC4	Q9Y696	253 aa		13.69	□□□□□ -0.22
CSF1-208	ENST00000526001	DENND4A	Q7Z401	1863 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001		I3L4J1	428 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	N4BP1	O75113	896 aa	Known RBP	13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	B3GAT3	O94766	335 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	BMP15	O95972	392 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	PDGFB	P01127	241 aa	Predicted RBP	13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	MCF2	P10911	925 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	PLCG1	P19174	1290 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	LONP1	P36776	959 aa	Known RBP	13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	UBA7	P41226	1012 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	YARS	P54577	528 aa	Known RBP	13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	CREM	Q03060	361 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	STRN3	Q13033	797 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	REST	Q13127	1097 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	MCM6	Q14566	821 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	PTPA	Q15257	358 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	PSMD5	Q16401	504 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	UPP1	Q16831	310 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	SPECC1	Q5M775	1068 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	FAM173B	Q6P4H8	233 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	DCLRE1A	Q6PJP8	1040 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	GPBP1	Q86WP2	473 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	PIK3R5	Q8WYR1	880 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	SMG7	Q92540	1137 aa	Known RBP	13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	CALML4	Q96GE6	196 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	ACAP3	Q96P50	834 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	REEP2	Q9BRK0	252 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	FOXD4L1	Q9NU39	408 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	KCND2	Q9NZV8	630 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	ANKFY1	Q9P2R3	1169 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	SORCS3	Q9UPU3	1222 aa		13.68	□□□□□ -0.22
CSF1-208	ENST00000526001	TMEM189-UBE2V1	I3L0A0	370 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	SLC26A4	O43511	780 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	SYT1	P21579	422 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	FGFR3	P22607	806 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	BRCC3	P46736	316 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	SMTN	P53814	917 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	NCKAP1L	P55160	1127 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	ELAVL2	Q12926	359 aa	Known RBP	13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	MTMR3	Q13615	1198 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	IER5L	Q5T953	404 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	USP49	Q70CQ1	688 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	PLCD3	Q8N3E9	789 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	TMEM130	Q8N3G9	435 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	HDAC7	Q8WUI4	952 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	RAD54L	Q92698	747 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	C18orf25	Q96B23	403 aa	Predicted RBP	13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	ACSF2	Q96CM8	615 aa	Predicted RBP	13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	UROC1	Q96N76	676 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	HAPLN2	Q9GZV7	340 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	PLEKHA4	Q9H4M7	779 aa		13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	WDR6	Q9NNW5	1121 aa	Known RBP	13.67	□□□□□ -0.22
CSF1-208	ENST00000526001	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms