RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 EPHB4P54760 987 aa5□□□□□ -1.61
CLK1-213ENST00000492793 SP140Q13342 867 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MRPL49Q13405 166 aaKnown RBP5□□□□□ -1.61
CLK1-213ENST00000492793 MTM1Q13496 603 aa5□□□□□ -1.61
CLK1-213ENST00000492793 GBX1Q14549 363 aa5□□□□□ -1.61
CLK1-213ENST00000492793 KIAA0753Q2KHM9 967 aa5□□□□□ -1.61
CLK1-213ENST00000492793 COBLL1Q53SF7 1204 aa5□□□□□ -1.61
CLK1-213ENST00000492793 FAM47AQ5JRC9 791 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MFSD14BQ5SR56 506 aa5□□□□□ -1.61
CLK1-213ENST00000492793 NPNTQ6UXI9 565 aa5□□□□□ -1.61
CLK1-213ENST00000492793 OVCH2Q7RTZ1 564 aa5□□□□□ -1.61
CLK1-213ENST00000492793 ZNF572Q7Z3I7 529 aaPredicted RBP5□□□□□ -1.61
CLK1-213ENST00000492793 LIMS2Q7Z4I7 341 aa5□□□□□ -1.61
CLK1-213ENST00000492793 CIR1Q86X95 450 aaPredicted RBP5□□□□□ -1.61
CLK1-213ENST00000492793 SIAH1Q8IUQ4 282 aa5□□□□□ -1.61
CLK1-213ENST00000492793 D2HGDHQ8N465 521 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MB21D1Q8N884 522 aa5□□□□□ -1.61
CLK1-213ENST00000492793 TTC17Q96AE7 1141 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
CLK1-213ENST00000492793 PHACTR3Q96KR7 559 aa5□□□□□ -1.61
CLK1-213ENST00000492793 MRI1Q9BV20 369 aa5□□□□□ -1.61
CLK1-213ENST00000492793 PARD6AQ9NPB6 346 aa5□□□□□ -1.61
CLK1-213ENST00000492793 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
CLK1-213ENST00000492793 PNPOQ9NVS9 261 aa5□□□□□ -1.61
CLK1-213ENST00000492793 PLA2G3Q9NZ20 509 aa5□□□□□ -1.61
CLK1-213ENST00000492793 CPA4Q9UI42 421 aa5□□□□□ -1.61
CLK1-213ENST00000492793 ZFR2Q9UPR6 939 aaKnown RBP5□□□□□ -1.61
CLK1-213ENST00000492793 CCDC194A0A1B0GVG4 234 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CFAP69A5D8W1 941 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 FAM227AF5H4B4 570 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 TPP1O14773 563 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 MFAP3LO75121 409 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 TUSC2O75896 110 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CD1AP06126 327 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 MALP21145 153 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 GUCY1A2P33402 732 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 IL12RB1P42701 662 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 HK3P52790 923 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CTXN1P60606 82 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 HHEXQ03014 270 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 TLE1Q04724 770 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 SNAPC2Q13487 334 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 HLTFQ14527 1009 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLK1-213ENST00000492793 ELAVL1Q15717 326 aaKnown RBP4.99□□□□□ -1.61
CLK1-213ENST00000492793 TBC1D10BQ4KMP7 808 aaPredicted RBP4.99□□□□□ -1.61
CLK1-213ENST00000492793 ANO6Q4KMQ2 910 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 FLYWCH1Q4VC44 716 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CCSAPQ6IQ19 270 aaPredicted RBP4.99□□□□□ -1.61
CLK1-213ENST00000492793 MFSD5Q6N075 450 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 ZNF529Q6P280 563 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 UBE3BQ7Z3V4 1068 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 SRGAP1Q7Z6B7 1085 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 FRMD5Q7Z6J6 570 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 SGMS1Q86VZ5 419 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 ELOA2Q8IYF1 753 aaPredicted RBP4.99□□□□□ -1.61
CLK1-213ENST00000492793 FAM156AQ8NDB6 213 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 IFI44Q8TCB0 444 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CASKIN2Q8WXE0 1202 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 SLC35A4Q96G79 324 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 MRGPRX4Q96LA9 322 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 SAMD11Q96NU1 681 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 MYOCQ99972 504 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 C11orf54Q9H0W9 315 aaPredicted RBP4.99□□□□□ -1.61
CLK1-213ENST00000492793 XYLT2Q9H1B5 865 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 MEGF9Q9H1U4 602 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 PPP4R1LQ9P1A2 415 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 CALCOCO1Q9P1Z2 691 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 POGKQ9P215 609 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 PCDHA1Q9Y5I3 950 aa4.99□□□□□ -1.61
CLK1-213ENST00000492793 TCRBV7S2A1N4TA0A589 114 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 PMS2P1A4D2B8 440 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 CAPN8A6NHC0 703 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 A6NNZ2 444 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 CXorf49A8MYA2 514 aaPredicted RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 PRICKLE3O43900 615 aaPredicted RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 MAP4K4O95819 1239 aaPredicted RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 PLATP00750 562 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 SNRPA1P09661 255 aaKnown RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 ALOX15P16050 662 aaPredicted RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 HK1P19367 917 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 CLRN1P58418 232 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 FGL2Q14314 439 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 MAP9Q49MG5 647 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 ANKS6Q68DC2 871 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 DARS2Q6PI48 645 aaKnown RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 FAM83AQ86UY5 434 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 GSPT2Q8IYD1 628 aaKnown RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 FUKQ8N0W3 1084 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 RNF169Q8NCN4 708 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 SLC35B2Q8TB61 432 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 TFAP2CQ92754 450 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 TNPO1Q92973 898 aaKnown RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 DMRTA2Q96SC8 542 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 LRFN3Q9BTN0 628 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 ENKD1Q9H0I2 346 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 SARS2Q9NP81 518 aaKnown RBP4.98□□□□□ -1.61
CLK1-213ENST00000492793 PCDHGB6Q9Y5F9 930 aa4.98□□□□□ -1.61
CLK1-213ENST00000492793 A0A1W2PPL8 197 aa4.97□□□□□ -1.61
CLK1-213ENST00000492793 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms